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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
DNIQGITKPAIRRLARRGGVKRISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVTS
LDVVYALKRQG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yfw-a2-m1-cD 71 71 1.0000 1.0000 1.0000 2.44e-46 2yfw-a2-m1-cD_2yfw-a2-m1-cF
2 2yfw-a2-m1-cF 72 71 1.0000 0.9861 1.0000 2.70e-46 2yfw-a2-m1-cD_2yfw-a2-m1-cF
3 7x58-a1-m1-cH 73 71 0.9155 0.8904 0.9155 1.84e-42 7x58-a1-m1-cB_7x58-a1-m1-cH
4 7x58-a1-m1-cB 73 71 0.9155 0.8904 0.9155 1.84e-42 7x58-a1-m1-cB_7x58-a1-m1-cH
5 1ku5-a1-m1-cB 66 62 0.3099 0.3333 0.3548 5.19e-04 1ku5-a1-m1-cA_1ku5-a1-m1-cB
6 1ku5-a1-m1-cA 66 62 0.3099 0.3333 0.3548 5.19e-04 1ku5-a1-m1-cA_1ku5-a1-m1-cB
7 1b67-a1-m1-cB 65 58 0.2535 0.2769 0.3103 0.022 1b67-a1-m1-cB_1b67-a1-m1-cA
8 1b67-a1-m1-cA 68 58 0.2535 0.2647 0.3103 0.024 1b67-a1-m1-cB_1b67-a1-m1-cA
9 5t5k-a1-m1-cF 67 63 0.2817 0.2985 0.3175 0.048 5t5k-a1-m1-cD_5t5k-a1-m1-cF, 5t5k-a1-m1-cE_5t5k-a1-m1-cF
10 5t5k-a1-m1-cE 67 63 0.2817 0.2985 0.3175 0.048 5t5k-a1-m1-cE_5t5k-a1-m1-cF
11 5t5k-a1-m1-cD 67 63 0.2817 0.2985 0.3175 0.048 5t5k-a1-m1-cD_5t5k-a1-m1-cF
12 7da0-a1-m2-cB 95 24 0.1690 0.1263 0.5000 0.63 7da0-a1-m1-cB_7da0-a1-m2-cB
13 7da0-a1-m1-cB 95 24 0.1690 0.1263 0.5000 0.63 7da0-a1-m1-cB_7da0-a1-m2-cB
14 1f1e-a1-m2-cA 147 57 0.2254 0.1088 0.2807 1.8 1f1e-a1-m1-cA_1f1e-a1-m2-cA
15 1f1e-a1-m1-cA 147 57 0.2254 0.1088 0.2807 1.8 1f1e-a1-m1-cA_1f1e-a1-m2-cA
16 2i5p-a1-m1-cP 309 34 0.1690 0.0388 0.3529 1.9 2i5p-a1-m1-cP_2i5p-a1-m1-cO
17 2i5p-a1-m1-cO 309 34 0.1690 0.0388 0.3529 1.9 2i5p-a1-m1-cP_2i5p-a1-m1-cO
18 1taf-a2-m5-cA 68 26 0.1408 0.1471 0.3846 3.1 1taf-a2-m4-cA_1taf-a2-m5-cA
19 1taf-a2-m4-cA 68 26 0.1408 0.1471 0.3846 3.1 1taf-a2-m4-cA_1taf-a2-m5-cA
20 3p2c-a1-m1-cB 431 36 0.2113 0.0348 0.4167 5.7 3p2c-a1-m1-cA_3p2c-a1-m1-cB
21 3p2c-a1-m1-cA 431 36 0.2113 0.0348 0.4167 5.7 3p2c-a1-m1-cA_3p2c-a1-m1-cB
22 2xzp-a1-m3-cA 621 16 0.1549 0.0177 0.6875 7.8 2xzp-a1-m2-cA_2xzp-a1-m3-cA
23 2xzp-a1-m2-cA 621 16 0.1549 0.0177 0.6875 7.8 2xzp-a1-m2-cA_2xzp-a1-m3-cA
24 7d69-a1-m1-cA 90 45 0.1831 0.1444 0.2889 9.2 7d69-a1-m1-cA_7d69-a1-m1-cE
25 7d69-a1-m1-cE 99 45 0.1831 0.1313 0.2889 9.2 7d69-a1-m1-cA_7d69-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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