Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
DNQKALEEQMNSINSVNDKLNKGKGKLSLSMNGNQLKATSSNAGYGISYEDKNWGIFVNG
EKVYTFNEKSTVGNISNDINKLNIKGMYIEIKQI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6wa1-a1-m1-cB 94 94 1.0000 1.0000 1.0000 7.77e-62 6wa1-a1-m1-cA_6wa1-a1-m1-cB
2 6wa1-a1-m1-cA 94 94 1.0000 1.0000 1.0000 7.77e-62 6wa1-a1-m1-cA_6wa1-a1-m1-cB
3 1opo-a1-m9-cB 267 65 0.2128 0.0749 0.3077 0.28 1opo-a1-m10-cA_1opo-a1-m9-cB, 1opo-a1-m9-cA_1opo-a1-m9-cB
4 1opo-a1-m9-cA 267 65 0.2128 0.0749 0.3077 0.28 1opo-a1-m9-cA_1opo-a1-m9-cB
5 1opo-a1-m8-cB 267 65 0.2128 0.0749 0.3077 0.28 1opo-a1-m8-cB_1opo-a1-m9-cC
6 1opo-a1-m10-cA 267 65 0.2128 0.0749 0.3077 0.28 1opo-a1-m10-cA_1opo-a1-m9-cB
7 1opo-a1-m9-cC 268 65 0.2128 0.0746 0.3077 0.29 1opo-a1-m8-cB_1opo-a1-m9-cC
8 5ifn-a1-m1-cA 257 30 0.1170 0.0428 0.3667 1.7 5ifn-a1-m1-cB_5ifn-a1-m1-cA
9 5ifn-a1-m1-cB 252 30 0.1170 0.0437 0.3667 1.8 5ifn-a1-m1-cB_5ifn-a1-m1-cA
10 6c72-a1-m1-cC 579 25 0.1383 0.0225 0.5200 2.6 6c72-a1-m1-cB_6c72-a1-m1-cC
11 6c72-a1-m1-cB 579 25 0.1383 0.0225 0.5200 2.6 6c72-a1-m1-cB_6c72-a1-m1-cC
12 7sp0-a1-m1-cA 253 29 0.1170 0.0435 0.3793 7.6 7sp0-a1-m1-cB_7sp0-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600