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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
DNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLVNDDQRLEQMI
SQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ypp-a2-m1-cD 90 90 1.0000 1.0000 1.0000 2.57e-63 5ypp-a2-m1-cC_5ypp-a2-m1-cD
2 5ypp-a2-m1-cC 90 90 1.0000 1.0000 1.0000 2.57e-63 5ypp-a2-m1-cC_5ypp-a2-m1-cD
3 2f1f-a2-m4-cB 158 70 0.2778 0.1582 0.3571 5.58e-09 2f1f-a2-m2-cB_2f1f-a2-m4-cB, 2f1f-a2-m4-cB_2f1f-a2-m4-cA
4 2f1f-a2-m2-cB 158 70 0.2778 0.1582 0.3571 5.58e-09 2f1f-a2-m2-cB_2f1f-a2-m4-cB
5 2f1f-a2-m4-cA 163 70 0.2778 0.1534 0.3571 5.98e-09 2f1f-a2-m4-cB_2f1f-a2-m4-cA
6 2pc6-a2-m1-cB 158 62 0.2333 0.1329 0.3387 3.57e-08 2pc6-a2-m1-cD_2pc6-a2-m1-cB
7 2fgc-a1-m2-cA 156 77 0.3222 0.1859 0.3766 7.49e-07 2fgc-a1-m1-cA_2fgc-a1-m2-cA
8 2fgc-a1-m1-cA 156 77 0.3222 0.1859 0.3766 7.49e-07 2fgc-a1-m1-cA_2fgc-a1-m2-cA
9 2pc6-a2-m1-cD 157 56 0.2000 0.1146 0.3214 1.26e-06 2pc6-a2-m1-cD_2pc6-a2-m1-cB
10 6u9h-a1-m1-cR 155 72 0.2778 0.1613 0.3472 2.35e-06 6u9h-a1-m1-cN_6u9h-a1-m1-cR
11 6u9h-a1-m1-cN 155 72 0.2778 0.1613 0.3472 2.35e-06 6u9h-a1-m1-cN_6u9h-a1-m1-cR
12 6vz8-a1-m1-cS 159 70 0.2444 0.1384 0.3143 7.01e-05 6vz8-a1-m1-cO_6vz8-a1-m1-cS
13 6vz8-a1-m1-cO 159 70 0.2444 0.1384 0.3143 7.01e-05 6vz8-a1-m1-cO_6vz8-a1-m1-cS
14 6pkw-a1-m1-cD 986 60 0.2000 0.0183 0.3000 5.9 6pkw-a1-m1-cB_6pkw-a1-m1-cD
15 6pkw-a1-m1-cB 986 60 0.2000 0.0183 0.3000 5.9 6pkw-a1-m1-cB_6pkw-a1-m1-cD
16 4a1f-a1-m1-cA 323 48 0.1222 0.0341 0.2292 9.4 4a1f-a1-m1-cB_4a1f-a1-m1-cA
17 7chk-a1-m9-cB 147 33 0.1111 0.0680 0.3030 9.8 7chk-a1-m8-cB_7chk-a1-m9-cB
18 7chk-a1-m8-cB 147 33 0.1111 0.0680 0.3030 9.8 7chk-a1-m8-cB_7chk-a1-m9-cB
19 4a1f-a1-m1-cB 307 48 0.1222 0.0358 0.2292 9.8 4a1f-a1-m1-cB_4a1f-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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