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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
DPAKAAFDSLQASATEMIGYAWAMVVVIVGATIGIKLFKKFTSKAS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8b3q-a1-m1-cEkE 46 46 1.0000 1.0000 1.0000 4.97e-27 8b3q-a1-m1-cAiA_8b3q-a1-m1-cEkE
2 8b3q-a1-m1-cAiA 46 46 1.0000 1.0000 1.0000 4.97e-27 8b3q-a1-m1-cAiA_8b3q-a1-m1-cEkE
3 8b3p-a1-m1-czzz 46 46 1.0000 1.0000 1.0000 4.97e-27 8b3p-a1-m1-crrr_8b3p-a1-m1-czzz
4 8b3p-a1-m1-crrr 46 46 1.0000 1.0000 1.0000 4.97e-27 8b3p-a1-m1-crrr_8b3p-a1-m1-czzz
5 1ifj-a1-m9-cA 50 46 0.9783 0.9000 0.9783 6.37e-26 1ifj-a1-m4-cA_1ifj-a1-m9-cA
6 1ifj-a1-m4-cA 50 46 0.9783 0.9000 0.9783 6.37e-26 1ifj-a1-m4-cA_1ifj-a1-m9-cA
7 1ifi-a1-m9-cA 50 46 0.9783 0.9000 0.9783 6.37e-26 1ifi-a1-m20-cA_1ifi-a1-m9-cA, 1ifi-a1-m3-cA_1ifi-a1-m9-cA
8 1ifi-a1-m3-cA 50 46 0.9783 0.9000 0.9783 6.37e-26 1ifi-a1-m3-cA_1ifi-a1-m9-cA
9 1ifi-a1-m20-cA 50 46 0.9783 0.9000 0.9783 6.37e-26 1ifi-a1-m20-cA_1ifi-a1-m9-cA
10 2hi5-a1-m9-cA 42 42 0.8913 0.9762 0.9762 3.62e-23 2hi5-a1-m3-cA_2hi5-a1-m9-cA
11 2hi5-a1-m3-cA 42 42 0.8913 0.9762 0.9762 3.62e-23 2hi5-a1-m3-cA_2hi5-a1-m9-cA
12 7qwn-a3-m1-cA 410 24 0.2609 0.0293 0.5000 4.7 7qwn-a3-m1-cB_7qwn-a3-m1-cA
13 7qwn-a3-m1-cB 407 24 0.2609 0.0295 0.5000 4.9 7qwn-a3-m1-cB_7qwn-a3-m1-cA, 7qwn-a3-m1-cB_7qwn-a3-m1-cC
14 7qwn-a3-m1-cC 409 24 0.2609 0.0293 0.5000 4.9 7qwn-a3-m1-cB_7qwn-a3-m1-cC
15 2zzv-a1-m1-cB 330 25 0.1957 0.0273 0.3600 9.3 2zzv-a1-m1-cA_2zzv-a1-m1-cB
16 2zzv-a1-m1-cA 330 25 0.1957 0.0273 0.3600 9.3 2zzv-a1-m1-cA_2zzv-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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