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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
DPDKLKKAIVQVEHDERPARLILNRRPPAEGYAWLKYEDDGQEFEANLADVKLVALIEG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1igq-a2-m1-cD 59 59 1.0000 1.0000 1.0000 7.49e-38 1igq-a2-m1-cB_1igq-a2-m1-cD
2 1igq-a2-m1-cB 57 57 0.9661 1.0000 1.0000 3.48e-36 1igq-a2-m1-cB_1igq-a2-m1-cD
3 1r9c-a1-m1-cA 125 37 0.2203 0.1040 0.3514 0.45 1r9c-a1-m1-cB_1r9c-a1-m1-cA
4 2i71-a2-m1-cA 366 29 0.1864 0.0301 0.3793 1.4 2i71-a2-m1-cA_2i71-a2-m2-cB
5 2i71-a1-m1-cA 366 29 0.1864 0.0301 0.3793 1.4 2i71-a1-m1-cA_2i71-a1-m1-cB
6 2i71-a2-m2-cB 371 29 0.1864 0.0296 0.3793 1.5 2i71-a2-m1-cA_2i71-a2-m2-cB
7 2i71-a1-m1-cB 371 29 0.1864 0.0296 0.3793 1.5 2i71-a1-m1-cA_2i71-a1-m1-cB
8 5xih-a1-m1-cA 477 44 0.2712 0.0335 0.3636 3.2 5xih-a1-m1-cA_5xih-a1-m1-cB
9 5xih-a1-m1-cB 479 44 0.2712 0.0334 0.3636 3.6 5xih-a1-m1-cA_5xih-a1-m1-cB
10 2hox-a3-m1-cC 425 13 0.1356 0.0188 0.6154 4.9 2hox-a3-m1-cA_2hox-a3-m1-cC, 2hox-a3-m1-cC_2hox-a3-m1-cB, 2hox-a3-m1-cC_2hox-a3-m1-cD
11 2hox-a3-m1-cA 425 13 0.1356 0.0188 0.6154 4.9 2hox-a3-m1-cA_2hox-a3-m1-cC, 2hox-a3-m1-cA_2hox-a3-m1-cD
12 2hox-a3-m1-cD 427 13 0.1356 0.0187 0.6154 5.1 2hox-a3-m1-cA_2hox-a3-m1-cD, 2hox-a3-m1-cC_2hox-a3-m1-cD
13 2hox-a3-m1-cB 427 13 0.1356 0.0187 0.6154 5.1 2hox-a3-m1-cC_2hox-a3-m1-cB
14 3on5-a2-m1-cA 330 27 0.1864 0.0333 0.4074 7.8 3on5-a2-m1-cB_3on5-a2-m1-cA
15 3on5-a1-m2-cA 330 27 0.1864 0.0333 0.4074 7.8 3on5-a1-m1-cA_3on5-a1-m2-cA
16 3on5-a1-m1-cA 330 27 0.1864 0.0333 0.4074 7.8 3on5-a1-m1-cA_3on5-a1-m2-cA, 3on5-a1-m2-cB_3on5-a1-m1-cA
17 5ysn-a1-m3-cC 453 23 0.1695 0.0221 0.4348 9.3 5ysn-a1-m1-cA_5ysn-a1-m3-cC, 5ysn-a1-m3-cA_5ysn-a1-m3-cC
18 5ysn-a1-m3-cA 453 23 0.1695 0.0221 0.4348 9.3 5ysn-a1-m3-cA_5ysn-a1-m3-cC
19 5ysn-a1-m1-cA 453 23 0.1695 0.0221 0.4348 9.3 5ysn-a1-m1-cA_5ysn-a1-m3-cC

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Reference:
Jacob Schwartz et al.

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