Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
DPEQSTPDEVNAALDRLLIADALAQLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKS
RLHYAVRALRLTLQELGVTR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hug-a6-m1-cA 80 80 1.0000 1.0000 1.0000 2.86e-53 3hug-a6-m1-cC_3hug-a6-m1-cA
2 3hug-a6-m1-cC 77 77 0.9625 1.0000 1.0000 2.15e-50 3hug-a6-m1-cC_3hug-a6-m1-cA
3 3hug-a6-m1-cM 74 74 0.9250 1.0000 1.0000 3.63e-48 3hug-a6-m1-cK_3hug-a6-m1-cM
4 3hug-a6-m1-cK 71 71 0.8875 1.0000 1.0000 3.12e-45 3hug-a6-m1-cK_3hug-a6-m1-cM
5 2i33-a1-m1-cB 236 46 0.2125 0.0720 0.3696 0.009 2i33-a1-m1-cB_2i33-a1-m1-cA
6 2i33-a1-m1-cA 238 45 0.2125 0.0714 0.3778 0.009 2i33-a1-m1-cB_2i33-a1-m1-cA
7 8b4h-a1-m1-cD 362 31 0.1625 0.0359 0.4194 0.32 8b4h-a1-m1-cC_8b4h-a1-m1-cD
8 8b4h-a1-m1-cC 362 31 0.1625 0.0359 0.4194 0.32 8b4h-a1-m1-cC_8b4h-a1-m1-cD
9 8b4h-a1-m1-cB 358 31 0.1625 0.0363 0.4194 0.33 8b4h-a1-m1-cA_8b4h-a1-m1-cB
10 8b4h-a1-m1-cA 358 31 0.1625 0.0363 0.4194 0.33 8b4h-a1-m1-cA_8b4h-a1-m1-cB
11 6to4-a1-m1-cA 291 76 0.3000 0.0825 0.3158 1.7 6to4-a1-m1-cD_6to4-a1-m1-cA
12 6to4-a1-m1-cD 276 76 0.3000 0.0870 0.3158 1.8 6to4-a1-m1-cD_6to4-a1-m1-cA
13 3klo-a1-m1-cA 217 30 0.1375 0.0507 0.3667 2.3 3klo-a1-m2-cB_3klo-a1-m1-cA
14 3klo-a1-m2-cB 216 30 0.1375 0.0509 0.3667 2.3 3klo-a1-m2-cB_3klo-a1-m1-cA
15 7bhy-a2-m2-cC 55 31 0.1750 0.2545 0.4516 6.2 7bhy-a2-m1-cC_7bhy-a2-m2-cC
16 7bhy-a2-m1-cC 55 31 0.1750 0.2545 0.4516 6.2 7bhy-a2-m1-cC_7bhy-a2-m2-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600