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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
DPFQQVVKDTKEQLNRINNYITRHNTAEEEIQDILKDVEETIVDLDRSIIVMKRDENEDV
SGREAQVKNIKQQLDALKLRFD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2c5j-a1-m1-cA 82 82 1.0000 1.0000 1.0000 6.02e-54 2c5j-a1-m1-cA_2c5j-a1-m1-cB
2 2c5j-a1-m1-cB 89 87 1.0000 0.9213 0.9425 2.98e-51 2c5j-a1-m1-cA_2c5j-a1-m1-cB
3 4z8n-a3-m1-cA 298 79 0.2683 0.0738 0.2785 0.22 4z8n-a3-m1-cB_4z8n-a3-m1-cA
4 4z8n-a3-m1-cB 284 79 0.2683 0.0775 0.2785 0.23 4z8n-a3-m1-cB_4z8n-a3-m1-cA
5 4gjf-a2-m2-cA 86 45 0.1829 0.1744 0.3333 0.84 4gjf-a2-m1-cA_4gjf-a2-m2-cA
6 4gjf-a2-m1-cA 86 45 0.1829 0.1744 0.3333 0.84 4gjf-a2-m1-cA_4gjf-a2-m2-cA
7 3fhg-a2-m2-cA 207 40 0.1829 0.0725 0.3750 1.6 3fhg-a2-m1-cA_3fhg-a2-m2-cA
8 3fhg-a2-m1-cA 207 40 0.1829 0.0725 0.3750 1.6 3fhg-a2-m1-cA_3fhg-a2-m2-cA
9 6xlk-a1-m1-cH 268 49 0.2073 0.0634 0.3469 1.8 6xlk-a1-m1-cG_6xlk-a1-m1-cH
10 6xlk-a1-m1-cG 268 49 0.2073 0.0634 0.3469 1.8 6xlk-a1-m1-cG_6xlk-a1-m1-cH
11 6z6e-a1-m3-cC 101 29 0.1341 0.1089 0.3793 3.2 6z6e-a1-m3-cC_6z6e-a1-m3-cB
12 6z6e-a1-m3-cB 102 29 0.1341 0.1078 0.3793 3.4 6z6e-a1-m3-cC_6z6e-a1-m3-cB

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Reference:
Jacob Schwartz et al.

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