Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=64)
DPKDALLRQFQKEIEELKKKLEELEKERDFYFGKLRNIELICQDPVLQRIVDILYATDEG
FVIP

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 5jx1-a1-m2-cA 64 64 1.0000 1.0000 1.0000 3.30e-40 5jx1-a1-m1-cA_5jx1-a1-m2-cA
2 5jx1-a1-m1-cA 64 64 1.0000 1.0000 1.0000 3.30e-40 5jx1-a1-m1-cA_5jx1-a1-m2-cA
3 5jvm-a1-m1-cA 82 77 0.8750 0.6829 0.7273 4.04e-30 5jvm-a1-m1-cB_5jvm-a1-m1-cA
4 5jvm-a1-m1-cB 79 75 0.8438 0.6835 0.7200 1.79e-28 5jvm-a1-m1-cB_5jvm-a1-m1-cA
5 5jvp-a2-m3-cB 88 80 0.8281 0.6023 0.6625 1.23e-25 5jvp-a2-m1-cB_5jvp-a2-m3-cB
6 5jvp-a2-m1-cB 88 80 0.8281 0.6023 0.6625 1.23e-25 5jvp-a2-m1-cB_5jvp-a2-m3-cB
7 5jvu-a1-m1-cA 76 66 0.7656 0.6447 0.7424 1.60e-25 5jvu-a1-m1-cB_5jvu-a1-m1-cA
8 6pf2-a1-m1-cA 157 62 0.6875 0.2803 0.7097 5.56e-25 6pf2-a1-m1-cB_6pf2-a1-m1-cA
9 5jv3-a2-m1-cD 68 62 0.6719 0.6324 0.6935 9.79e-23 5jv3-a2-m1-cC_5jv3-a2-m1-cD
10 3mtu-a2-m1-cA 72 63 0.6250 0.5556 0.6349 3.22e-21 3mtu-a2-m1-cB_3mtu-a2-m1-cA
11 5jv3-a2-m1-cC 64 60 0.6406 0.6406 0.6833 6.81e-21 5jv3-a2-m1-cC_5jv3-a2-m1-cD
12 6pf2-a1-m1-cB 150 57 0.6094 0.2600 0.6842 2.03e-20 6pf2-a1-m1-cB_6pf2-a1-m1-cA
13 4xa1-a1-m1-cB 155 57 0.5938 0.2452 0.6667 5.47e-20 4xa1-a1-m1-cA_4xa1-a1-m1-cB
14 5jvu-a1-m1-cB 69 59 0.6562 0.6087 0.7119 7.10e-20 5jvu-a1-m1-cB_5jvu-a1-m1-cA
15 4xa1-a1-m1-cA 153 55 0.5625 0.2353 0.6545 1.23e-18 4xa1-a1-m1-cA_4xa1-a1-m1-cB
16 6pfp-a2-m1-cD 156 58 0.5938 0.2436 0.6552 1.77e-18 6pfp-a2-m1-cC_6pfp-a2-m1-cD
17 6pfp-a2-m1-cC 156 58 0.5938 0.2436 0.6552 1.77e-18 6pfp-a2-m1-cC_6pfp-a2-m1-cD
18 3mtu-a2-m1-cD 64 58 0.5469 0.5469 0.6034 1.21e-16 3mtu-a2-m1-cD_3mtu-a2-m1-cB
19 3mtu-a2-m1-cB 65 57 0.5312 0.5231 0.5965 3.48e-16 3mtu-a2-m1-cB_3mtu-a2-m1-cA, 3mtu-a2-m1-cD_3mtu-a2-m1-cB
20 6yf5-a2-m1-cD 82 58 0.5469 0.4268 0.6034 9.50e-16 6yf5-a2-m1-cD_6yf5-a2-m1-cC
21 6yf5-a2-m1-cC 87 58 0.5469 0.4023 0.6034 9.55e-16 6yf5-a2-m1-cD_6yf5-a2-m1-cC
22 4xa3-a1-m1-cA 142 41 0.4844 0.2183 0.7561 1.96e-13 4xa3-a1-m1-cA_4xa3-a1-m1-cB
23 4xa6-a2-m1-cC 100 48 0.5469 0.3500 0.7292 4.75e-13 4xa6-a2-m1-cD_4xa6-a2-m1-cC
24 4xa3-a1-m1-cB 142 40 0.4688 0.2113 0.7500 2.22e-12 4xa3-a1-m1-cA_4xa3-a1-m1-cB
25 4xa6-a2-m1-cD 93 47 0.5312 0.3656 0.7234 3.84e-12 4xa6-a2-m1-cD_4xa6-a2-m1-cC
26 4xa6-a1-m1-cA 149 47 0.5312 0.2282 0.7234 7.79e-12 4xa6-a1-m1-cB_4xa6-a1-m1-cA
27 4xa6-a1-m1-cB 146 45 0.5156 0.2260 0.7333 2.81e-11 4xa6-a1-m1-cB_4xa6-a1-m1-cA
28 5m9e-a2-m1-cD 70 68 0.4219 0.3857 0.3971 2.14e-07 5m9e-a2-m1-cC_5m9e-a2-m1-cD
29 4e61-a1-m1-cA 91 70 0.4062 0.2857 0.3714 3.46e-07 4e61-a1-m1-cB_4e61-a1-m1-cA
30 5m9e-a2-m1-cC 68 67 0.4219 0.3971 0.4030 3.69e-07 5m9e-a2-m1-cC_5m9e-a2-m1-cD
31 4e61-a1-m1-cB 84 64 0.3594 0.2738 0.3594 3.85e-05 4e61-a1-m1-cB_4e61-a1-m1-cA
32 2dq0-a1-m1-cB 447 41 0.2812 0.0403 0.4390 0.11 2dq0-a1-m1-cA_2dq0-a1-m1-cB
33 2dq0-a1-m1-cA 447 41 0.2812 0.0403 0.4390 0.11 2dq0-a1-m1-cA_2dq0-a1-m1-cB
34 4u6u-a3-m2-cC 67 34 0.2031 0.1940 0.3824 1.1 4u6u-a3-m1-cA_4u6u-a3-m2-cC
35 4u6u-a3-m1-cA 67 34 0.2031 0.1940 0.3824 1.1 4u6u-a3-m1-cA_4u6u-a3-m2-cC
36 3caz-a1-m1-cB 207 36 0.2344 0.0725 0.4167 1.9 3caz-a1-m1-cA_3caz-a1-m1-cB
37 3caz-a1-m1-cA 202 36 0.2344 0.0743 0.4167 2.1 3caz-a1-m1-cA_3caz-a1-m1-cB
38 1ses-a1-m1-cB 421 18 0.1406 0.0214 0.5000 2.5 1ses-a1-m1-cA_1ses-a1-m1-cB
39 1ses-a1-m1-cA 421 18 0.1406 0.0214 0.5000 2.5 1ses-a1-m1-cA_1ses-a1-m1-cB
40 4hhe-a1-m2-cA 297 18 0.1562 0.0337 0.5556 3.8 4hhe-a1-m1-cA_4hhe-a1-m2-cA
41 4hhe-a1-m1-cA 297 18 0.1562 0.0337 0.5556 3.8 4hhe-a1-m1-cA_4hhe-a1-m2-cA
42 5h5l-a1-m1-cB 199 39 0.2188 0.0704 0.3590 7.0 5h5l-a1-m1-cA_5h5l-a1-m1-cB
43 7w54-a1-m1-cA 508 43 0.2656 0.0335 0.3953 8.4 7w54-a1-m1-cA_7w54-a1-m1-cB
44 7w54-a1-m1-cB 513 43 0.2656 0.0331 0.3953 8.5 7w54-a1-m1-cA_7w54-a1-m1-cB
45 3qh9-a1-m2-cA 66 25 0.2031 0.1970 0.5200 8.5 3qh9-a1-m1-cA_3qh9-a1-m2-cA
46 3qh9-a1-m1-cA 66 25 0.2031 0.1970 0.5200 8.5 3qh9-a1-m1-cA_3qh9-a1-m2-cA
47 3b6u-a1-m1-cB 343 10 0.1406 0.0262 0.9000 9.0 3b6u-a1-m1-cA_3b6u-a1-m1-cB
48 2p1o-a2-m2-cB 571 26 0.1562 0.0175 0.3846 9.6 2p1o-a2-m1-cB_2p1o-a2-m2-cB
49 2p1o-a2-m1-cB 571 26 0.1562 0.0175 0.3846 9.6 2p1o-a2-m1-cB_2p1o-a2-m2-cB
50 6jyi-a1-m1-cA 166 22 0.1719 0.0663 0.5000 9.7 6jyi-a1-m1-cB_6jyi-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600