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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
DPLSGLTDQERTLLGLLSEGLTNKQIADRFLAEKTVKNYVSRLLAKLGERRTQAAVFATE
LKRSRPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1zlj-a4-m1-cG 67 67 1.0000 1.0000 1.0000 3.76e-43 1zlj-a4-m1-cH_1zlj-a4-m1-cG
2 1zlj-a4-m1-cH 64 63 0.9403 0.9844 1.0000 1.07e-39 1zlj-a4-m1-cH_1zlj-a4-m1-cG
3 3c3w-a1-m1-cA 211 67 0.9701 0.3081 0.9701 4.63e-36 3c3w-a1-m1-cB_3c3w-a1-m1-cA
4 3c3w-a1-m1-cB 210 66 0.9552 0.3048 0.9697 2.35e-35 3c3w-a1-m1-cB_3c3w-a1-m1-cA
5 3c57-a1-m1-cA 51 51 0.7313 0.9608 0.9608 1.36e-25 3c57-a1-m1-cB_3c57-a1-m1-cA
6 3c57-a1-m1-cB 49 49 0.7015 0.9592 0.9592 3.99e-24 3c57-a1-m1-cB_3c57-a1-m1-cA
7 4wuh-a1-m1-cB 68 55 0.4030 0.3971 0.4909 1.35e-10 4wuh-a1-m1-cA_4wuh-a1-m1-cB
8 4wuh-a1-m1-cA 68 55 0.4030 0.3971 0.4909 1.35e-10 4wuh-a1-m1-cA_4wuh-a1-m1-cB
9 5hev-a2-m1-cB 209 55 0.4478 0.1435 0.5455 4.78e-09 5hev-a2-m1-cB_5hev-a2-m1-cC
10 5hev-a2-m1-cC 210 55 0.4478 0.1429 0.5455 5.39e-09 5hev-a2-m1-cB_5hev-a2-m1-cC
11 7x1k-a1-m1-cA 69 59 0.4179 0.4058 0.4746 9.89e-09 7x1k-a1-m1-cB_7x1k-a1-m1-cA
12 7x1k-a1-m1-cB 68 59 0.4179 0.4118 0.4746 9.99e-09 7x1k-a1-m1-cB_7x1k-a1-m1-cA
13 4zms-a1-m1-cA 207 57 0.3731 0.1208 0.4386 2.72e-07 4zms-a1-m1-cB_4zms-a1-m1-cA
14 4zms-a1-m1-cB 200 57 0.3731 0.1250 0.4386 2.91e-07 4zms-a1-m1-cB_4zms-a1-m1-cA
15 1fse-a2-m1-cC 67 53 0.3582 0.3582 0.4528 1.19e-06 1fse-a2-m1-cF_1fse-a2-m1-cC
16 1fse-a3-m1-cD 66 53 0.3582 0.3636 0.4528 1.34e-06 1fse-a3-m1-cE_1fse-a3-m1-cD
17 1fse-a3-m1-cE 64 53 0.3582 0.3750 0.4528 1.51e-06 1fse-a3-m1-cE_1fse-a3-m1-cD
18 4ldz-a1-m1-cA 196 43 0.2687 0.0918 0.4186 0.001 4ldz-a1-m1-cB_4ldz-a1-m1-cA
19 4ldz-a1-m1-cB 188 43 0.2687 0.0957 0.4186 0.001 4ldz-a1-m1-cB_4ldz-a1-m1-cA
20 1rnl-a3-m2-cA 200 57 0.3433 0.1150 0.4035 0.005 1rnl-a3-m1-cA_1rnl-a3-m2-cA
21 1rnl-a3-m1-cA 200 57 0.3433 0.1150 0.4035 0.005 1rnl-a3-m1-cA_1rnl-a3-m2-cA
22 1rnl-a2-m4-cA 200 57 0.3433 0.1150 0.4035 0.005 1rnl-a2-m2-cA_1rnl-a2-m4-cA
23 1rnl-a2-m2-cA 200 57 0.3433 0.1150 0.4035 0.005 1rnl-a2-m2-cA_1rnl-a2-m4-cA
24 3clo-a2-m2-cC 248 58 0.2687 0.0726 0.3103 0.32 3clo-a2-m1-cC_3clo-a2-m2-cC
25 3clo-a2-m1-cC 248 58 0.2687 0.0726 0.3103 0.32 3clo-a2-m1-cC_3clo-a2-m2-cC
26 7dd0-a2-m1-cD 241 54 0.2985 0.0830 0.3704 0.45 7dd0-a2-m1-cD_7dd0-a2-m1-cB
27 7dd0-a2-m1-cB 260 54 0.2985 0.0769 0.3704 0.46 7dd0-a2-m1-cD_7dd0-a2-m1-cB
28 7vim-a1-m1-cA 64 43 0.2537 0.2656 0.3953 1.1 7vim-a1-m1-cA_7vim-a1-m2-cB
29 7vim-a1-m2-cB 67 43 0.2537 0.2537 0.3953 1.1 7vim-a1-m1-cA_7vim-a1-m2-cB
30 2krf-a1-m1-cB 69 55 0.2537 0.2464 0.3091 1.4 2krf-a1-m1-cA_2krf-a1-m1-cB
31 2krf-a1-m1-cA 69 55 0.2537 0.2464 0.3091 1.4 2krf-a1-m1-cA_2krf-a1-m1-cB
32 4o87-a3-m1-cA 318 53 0.2537 0.0535 0.3208 1.4 4o87-a3-m1-cA_4o87-a3-m2-cB
33 4o87-a3-m2-cB 319 53 0.2537 0.0533 0.3208 1.5 4o87-a3-m1-cA_4o87-a3-m2-cB, 4o87-a3-m1-cB_4o87-a3-m2-cB
34 4o87-a3-m1-cB 319 53 0.2537 0.0533 0.3208 1.5 4o87-a3-m1-cB_4o87-a3-m2-cB
35 4f5x-a1-m9-cW 975 38 0.2239 0.0154 0.3947 1.8 4f5x-a1-m7-cW_4f5x-a1-m9-cW, 4f5x-a1-m8-cW_4f5x-a1-m9-cW
36 4f5x-a1-m8-cW 975 38 0.2239 0.0154 0.3947 1.8 4f5x-a1-m8-cW_4f5x-a1-m9-cW
37 4f5x-a1-m7-cW 975 38 0.2239 0.0154 0.3947 1.8 4f5x-a1-m7-cW_4f5x-a1-m9-cW
38 1je8-a2-m1-cF 63 58 0.2836 0.3016 0.3276 1.9 1je8-a2-m1-cF_1je8-a2-m1-cE
39 1je8-a2-m1-cE 64 58 0.2836 0.2969 0.3276 2.2 1je8-a2-m1-cF_1je8-a2-m1-cE
40 6nbt-a3-m4-cA 181 46 0.2388 0.0884 0.3478 7.2 6nbt-a3-m4-cA_6nbt-a3-m1-cB
41 4z8t-a1-m2-cA 329 40 0.1940 0.0395 0.3250 9.5 4z8t-a1-m1-cA_4z8t-a1-m2-cA
42 4z8t-a1-m1-cA 329 40 0.1940 0.0395 0.3250 9.5 4z8t-a1-m1-cA_4z8t-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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