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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
DPMFIIVCYDVETITQEGRARLRKVAKTCESHGQRVQKSVFECQLEPADYLQFEAKLSKI
INSKTDNLRIYSLDAISVSKIKQFGVSNI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7f84-a1-m1-cB 89 89 1.0000 1.0000 1.0000 1.51e-62 7f84-a1-m1-cA_7f84-a1-m1-cB
2 7f84-a1-m1-cA 89 89 1.0000 1.0000 1.0000 1.51e-62 7f84-a1-m1-cA_7f84-a1-m1-cB
3 4qr2-a1-m1-cA 83 83 0.4270 0.4578 0.4578 1.08e-22 4qr2-a1-m1-cB_4qr2-a1-m1-cA
4 4qr2-a1-m1-cB 82 71 0.4157 0.4512 0.5211 2.44e-22 4qr2-a1-m1-cB_4qr2-a1-m1-cA
5 4es1-a1-m2-cA 95 83 0.3820 0.3579 0.4096 1.68e-19 4es1-a1-m1-cA_4es1-a1-m2-cA
6 4es1-a1-m1-cA 95 83 0.3820 0.3579 0.4096 1.68e-19 4es1-a1-m1-cA_4es1-a1-m2-cA
7 8d3q-a1-m1-cF 98 83 0.3820 0.3469 0.4096 1.94e-19 8d3q-a1-m1-cE_8d3q-a1-m1-cF
8 8d3q-a1-m1-cE 98 83 0.3820 0.3469 0.4096 1.94e-19 8d3q-a1-m1-cE_8d3q-a1-m1-cF
9 5h1o-a1-m1-cA 86 83 0.3933 0.4070 0.4217 4.70e-19 5h1o-a1-m1-cB_5h1o-a1-m1-cA
10 3oq2-a3-m4-cB 102 86 0.3708 0.3235 0.3837 2.79e-18 3oq2-a3-m1-cA_3oq2-a3-m4-cB, 3oq2-a3-m3-cA_3oq2-a3-m4-cB
11 3oq2-a2-m2-cB 102 86 0.3708 0.3235 0.3837 2.79e-18 3oq2-a2-m2-cA_3oq2-a2-m2-cB
12 3oq2-a3-m3-cA 99 86 0.3708 0.3333 0.3837 2.98e-18 3oq2-a3-m3-cA_3oq2-a3-m4-cB
13 3oq2-a3-m1-cA 99 86 0.3708 0.3333 0.3837 2.98e-18 3oq2-a3-m1-cA_3oq2-a3-m4-cB
14 3oq2-a2-m2-cA 99 86 0.3708 0.3333 0.3837 2.98e-18 3oq2-a2-m2-cA_3oq2-a2-m2-cB
15 5h1o-a1-m1-cB 83 83 0.3933 0.4217 0.4217 3.71e-17 5h1o-a1-m1-cB_5h1o-a1-m1-cA
16 7ei1-a1-m1-cR 84 74 0.3034 0.3214 0.3649 1.20e-08 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
17 7ei1-a1-m1-cQ 84 74 0.3034 0.3214 0.3649 1.20e-08 7ei1-a1-m1-cQ_7ei1-a1-m1-cR
18 7kfu-a1-m1-cB 96 77 0.2921 0.2708 0.3377 2.85e-06 7kfu-a1-m1-cA_7kfu-a1-m1-cB
19 7kfu-a1-m1-cA 96 77 0.2921 0.2708 0.3377 2.85e-06 7kfu-a1-m1-cA_7kfu-a1-m1-cB
20 7cr8-a6-m1-cF 93 83 0.2697 0.2581 0.2892 4.26e-06 7cr8-a6-m1-cE_7cr8-a6-m1-cF
21 7cr8-a6-m1-cE 93 83 0.2697 0.2581 0.2892 4.26e-06 7cr8-a6-m1-cE_7cr8-a6-m1-cF
22 5g4d-a1-m2-cA 79 71 0.2472 0.2785 0.3099 4.81e-06 5g4d-a1-m1-cA_5g4d-a1-m2-cA
23 5g4d-a1-m1-cA 79 71 0.2472 0.2785 0.3099 4.81e-06 5g4d-a1-m1-cA_5g4d-a1-m2-cA
24 7mid-a1-m1-cC 95 68 0.2472 0.2316 0.3235 5.26e-06 7mid-a1-m1-cD_7mid-a1-m1-cC
25 7mid-a1-m1-cD 91 68 0.2472 0.2418 0.3235 6.10e-06 7mid-a1-m1-cD_7mid-a1-m1-cC
26 1zpw-a2-m2-cX 82 83 0.2809 0.3049 0.3012 0.010 1zpw-a2-m1-cX_1zpw-a2-m2-cX
27 1zpw-a2-m1-cX 82 83 0.2809 0.3049 0.3012 0.010 1zpw-a2-m1-cX_1zpw-a2-m2-cX
28 4rrg-a1-m1-cB 138 22 0.1236 0.0797 0.5000 4.6 4rrg-a1-m1-cA_4rrg-a1-m1-cB
29 4rrg-a1-m1-cA 138 22 0.1236 0.0797 0.5000 4.6 4rrg-a1-m1-cA_4rrg-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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