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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
DQENMLKISGYPGMLNTFGIAQLLTPYRVNGITITGAQSAVVALENKFQVYQAVQDFNGK
KLDRNHKLQVSSLVVSSPAVPL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7d2y-a1-m1-cC 82 82 1.0000 1.0000 1.0000 1.84e-56 7d2y-a1-m1-cD_7d2y-a1-m1-cC
2 7d2y-a1-m1-cD 81 81 0.9878 1.0000 1.0000 1.61e-55 7d2y-a1-m1-cD_7d2y-a1-m1-cC
3 3wye-a1-m2-cA 255 51 0.1951 0.0627 0.3137 0.27 3wye-a1-m2-cB_3wye-a1-m2-cA
4 3bez-a1-m1-cB 465 48 0.1829 0.0323 0.3125 2.9 3bez-a1-m1-cA_3bez-a1-m1-cB
5 3bez-a1-m1-cA 465 48 0.1829 0.0323 0.3125 2.9 3bez-a1-m1-cA_3bez-a1-m1-cB
6 3a28-a2-m1-cH 257 61 0.2195 0.0700 0.2951 3.8 3a28-a2-m1-cE_3a28-a2-m1-cH, 3a28-a2-m1-cG_3a28-a2-m1-cH
7 3a28-a2-m1-cG 257 61 0.2195 0.0700 0.2951 3.8 3a28-a2-m1-cG_3a28-a2-m1-cH
8 3a28-a2-m1-cE 257 61 0.2195 0.0700 0.2951 3.8 3a28-a2-m1-cE_3a28-a2-m1-cH
9 2qe8-a2-m2-cB 332 56 0.1707 0.0422 0.2500 4.1 2qe8-a2-m2-cB_2qe8-a2-m1-cA, 2qe8-a2-m2-cB_2qe8-a2-m2-cA
10 2qe8-a2-m2-cA 333 56 0.1707 0.0420 0.2500 4.2 2qe8-a2-m2-cB_2qe8-a2-m2-cA
11 2qe8-a2-m1-cA 333 56 0.1707 0.0420 0.2500 4.2 2qe8-a2-m2-cB_2qe8-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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