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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
DQYKPKLELLSERLNEEMKRIGTDINFSYNDTIKGLVVSVKDANGDKVIREIPSKEAVEL
MQRMRDVIGIIFD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6jsx-a1-m1-cB 73 73 1.0000 1.0000 1.0000 2.91e-48 6jsx-a1-m1-cA_6jsx-a1-m1-cB
2 6jsx-a1-m1-cA 73 73 1.0000 1.0000 1.0000 2.91e-48 6jsx-a1-m1-cA_6jsx-a1-m1-cB
3 1apy-a1-m1-cD 141 23 0.1644 0.0851 0.5217 0.25 1apy-a1-m1-cB_1apy-a1-m1-cD
4 1apy-a1-m1-cB 141 23 0.1644 0.0851 0.5217 0.25 1apy-a1-m1-cB_1apy-a1-m1-cD
5 1nyr-a1-m1-cB 637 49 0.1918 0.0220 0.2857 1.1 1nyr-a1-m1-cB_1nyr-a1-m1-cA
6 1nyr-a1-m1-cA 642 49 0.1918 0.0218 0.2857 1.1 1nyr-a1-m1-cB_1nyr-a1-m1-cA
7 5oev-a1-m1-cC 397 61 0.2329 0.0428 0.2787 1.4 5oev-a1-m1-cC_5oev-a1-m1-cA
8 5oev-a2-m1-cB 397 61 0.2329 0.0428 0.2787 1.4 5oev-a2-m1-cB_5oev-a2-m1-cD
9 5oev-a1-m1-cA 451 61 0.2329 0.0377 0.2787 1.8 5oev-a1-m1-cC_5oev-a1-m1-cA
10 5oev-a2-m1-cD 448 61 0.2329 0.0379 0.2787 1.8 5oev-a2-m1-cB_5oev-a2-m1-cD
11 2aeu-a1-m2-cA 366 27 0.1644 0.0328 0.4444 2.8 2aeu-a1-m1-cA_2aeu-a1-m2-cA
12 2aeu-a1-m1-cA 366 27 0.1644 0.0328 0.4444 2.8 2aeu-a1-m1-cA_2aeu-a1-m2-cA
13 7o78-a1-m1-cB 492 47 0.2329 0.0346 0.3617 5.1 7o78-a1-m1-cA_7o78-a1-m1-cB
14 7o78-a1-m1-cA 491 47 0.2329 0.0346 0.3617 5.6 7o78-a1-m1-cA_7o78-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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