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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
DRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLT
ITSSSSDGVLTVNGPRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2y1y-a1-m2-cA 77 77 1.0000 1.0000 1.0000 1.08e-51 2y1y-a1-m1-cA_2y1y-a1-m2-cA
2 2y1y-a1-m1-cA 77 77 1.0000 1.0000 1.0000 1.08e-51 2y1y-a1-m1-cA_2y1y-a1-m2-cA
3 3l1g-a1-m2-cA 95 78 1.0000 0.8105 0.9872 5.20e-50 3l1g-a1-m1-cA_3l1g-a1-m2-cA
4 3l1g-a1-m1-cA 95 78 1.0000 0.8105 0.9872 5.20e-50 3l1g-a1-m1-cA_3l1g-a1-m2-cA
5 2n0k-a1-m1-cB 89 78 0.9870 0.8539 0.9744 2.77e-49 2n0k-a1-m1-cA_2n0k-a1-m1-cB
6 2n0k-a1-m1-cA 89 78 0.9870 0.8539 0.9744 2.77e-49 2n0k-a1-m1-cA_2n0k-a1-m1-cB
7 2y1z-a1-m1-cB 87 78 0.9870 0.8736 0.9744 4.78e-49 2y1z-a1-m1-cA_2y1z-a1-m1-cB
8 2y1z-a1-m1-cA 85 78 0.9870 0.8941 0.9744 4.92e-49 2y1z-a1-m1-cA_2y1z-a1-m1-cB
9 3j07-a1-m1-cX 175 78 1.0000 0.4400 0.9872 5.18e-49 3j07-a1-m1-cG_3j07-a1-m1-cX, 3j07-a1-m1-cS_3j07-a1-m1-cX, 3j07-a1-m1-cW_3j07-a1-m1-cX
10 3j07-a1-m1-cW 175 78 1.0000 0.4400 0.9872 5.18e-49 3j07-a1-m1-cI_3j07-a1-m1-cW, 3j07-a1-m1-cW_3j07-a1-m1-cX
11 3j07-a1-m1-cS 175 78 1.0000 0.4400 0.9872 5.18e-49 3j07-a1-m1-cS_3j07-a1-m1-cX
12 3j07-a1-m1-cI 175 78 1.0000 0.4400 0.9872 5.18e-49 3j07-a1-m1-cI_3j07-a1-m1-cW
13 3j07-a1-m1-cG 175 78 1.0000 0.4400 0.9872 5.18e-49 3j07-a1-m1-cG_3j07-a1-m1-cX
14 2ygd-a1-m1-cX 175 78 1.0000 0.4400 0.9872 5.18e-49 2ygd-a1-m1-cU_2ygd-a1-m1-cX, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
15 2ygd-a1-m1-cW 175 78 1.0000 0.4400 0.9872 5.18e-49 2ygd-a1-m1-cC_2ygd-a1-m1-cW, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
16 2ygd-a1-m1-cV 175 78 1.0000 0.4400 0.9872 5.18e-49 2ygd-a1-m1-cF_2ygd-a1-m1-cV
17 2ygd-a1-m1-cU 175 78 1.0000 0.4400 0.9872 5.18e-49 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cU_2ygd-a1-m1-cX
18 2ygd-a1-m1-cF 175 78 1.0000 0.4400 0.9872 5.18e-49 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cF_2ygd-a1-m1-cV
19 2ygd-a1-m1-cC 175 78 1.0000 0.4400 0.9872 5.18e-49 2ygd-a1-m1-cC_2ygd-a1-m1-cW
20 4m5t-a3-m1-cE 85 78 0.9870 0.8941 0.9744 5.55e-49 4m5t-a3-m1-cC_4m5t-a3-m1-cE
21 4m5t-a3-m1-cG 86 78 0.9870 0.8837 0.9744 5.78e-49 4m5t-a3-m1-cC_4m5t-a3-m1-cG
22 6bp9-a1-m1-cB 89 78 0.9870 0.8539 0.9744 5.92e-49 6bp9-a1-m1-cA_6bp9-a1-m1-cB
23 6bp9-a1-m1-cA 89 78 0.9870 0.8539 0.9744 5.92e-49 6bp9-a1-m1-cA_6bp9-a1-m1-cB
24 4m5t-a3-m1-cC 85 78 0.9740 0.8824 0.9615 2.13e-46 4m5t-a3-m1-cA_4m5t-a3-m1-cC, 4m5t-a3-m1-cC_4m5t-a3-m1-cE, 4m5t-a3-m1-cC_4m5t-a3-m1-cG
25 4m5t-a3-m1-cA 82 78 0.9351 0.8780 0.9231 2.13e-43 4m5t-a3-m1-cA_4m5t-a3-m1-cC
26 3n3e-a1-m1-cB 104 77 0.6104 0.4519 0.6104 9.28e-31 3n3e-a1-m1-cB_3n3e-a1-m1-cA
27 3n3e-a1-m1-cA 106 77 0.6104 0.4434 0.6104 9.51e-31 3n3e-a1-m1-cB_3n3e-a1-m1-cA
28 6dv5-a1-m1-cF 163 75 0.5714 0.2699 0.5867 2.00e-25 6dv5-a1-m1-cF_6dv5-a1-m1-cU
29 6dv5-a1-m1-cJ 162 76 0.5714 0.2716 0.5789 2.01e-25 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
30 6dv5-a1-m1-cK 175 75 0.5714 0.2514 0.5867 2.03e-25 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
31 6dv5-a1-m1-cP 164 75 0.5714 0.2683 0.5867 2.05e-25 6dv5-a1-m1-cP_6dv5-a1-m1-cX
32 6dv5-a1-m1-cX 166 75 0.5714 0.2651 0.5867 2.18e-25 6dv5-a1-m1-cP_6dv5-a1-m1-cX
33 6dv5-a1-m1-cU 175 75 0.5714 0.2514 0.5867 2.33e-25 6dv5-a1-m1-cF_6dv5-a1-m1-cU
34 6f2r-a1-m1-cD 80 76 0.4545 0.4375 0.4605 8.46e-22 6f2r-a1-m1-cD_6f2r-a1-m1-cC
35 6f2r-a1-m1-cC 121 76 0.4545 0.2893 0.4605 2.65e-21 6f2r-a1-m1-cD_6f2r-a1-m1-cC
36 2bol-a1-m1-cB 290 65 0.2468 0.0655 0.2923 1.93e-04 2bol-a1-m1-cB_2bol-a1-m1-cA
37 5j7n-a3-m3-cA 109 84 0.2987 0.2110 0.2738 8.01e-04 5j7n-a3-m1-cA_5j7n-a3-m3-cA
38 5j7n-a3-m1-cA 109 84 0.2987 0.2110 0.2738 8.01e-04 5j7n-a3-m1-cA_5j7n-a3-m3-cA
39 5j7n-a2-m2-cA 109 84 0.2987 0.2110 0.2738 8.01e-04 5j7n-a2-m1-cA_5j7n-a2-m2-cA
40 5j7n-a2-m1-cA 109 84 0.2987 0.2110 0.2738 8.01e-04 5j7n-a2-m1-cA_5j7n-a2-m2-cA
41 3gla-a1-m1-cA 97 82 0.2597 0.2062 0.2439 0.003 3gla-a1-m1-cA_3gla-a1-m1-cB
42 3gla-a1-m1-cB 99 82 0.2597 0.2020 0.2439 0.003 3gla-a1-m1-cA_3gla-a1-m1-cB
43 2bol-a1-m1-cA 301 65 0.2468 0.0631 0.2923 0.006 2bol-a1-m1-cB_2bol-a1-m1-cA
44 2bol-a1-m1-cA 301 74 0.2468 0.0631 0.2568 7.2 2bol-a1-m1-cB_2bol-a1-m1-cA
45 5ds2-a2-m1-cD 94 59 0.2208 0.1809 0.2881 0.065 5ds2-a2-m1-cC_5ds2-a2-m1-cD
46 5ds2-a2-m1-cC 94 59 0.2208 0.1809 0.2881 0.065 5ds2-a2-m1-cC_5ds2-a2-m1-cD
47 4rzk-a1-m1-cA 87 79 0.2727 0.2414 0.2658 0.13 4rzk-a1-m1-cA_4rzk-a1-m1-cB
48 3ihj-a2-m2-cA 461 38 0.1818 0.0304 0.3684 0.14 3ihj-a2-m1-cA_3ihj-a2-m2-cA
49 3ihj-a2-m1-cA 461 38 0.1818 0.0304 0.3684 0.14 3ihj-a2-m1-cA_3ihj-a2-m2-cA
50 4rzk-a1-m1-cB 87 79 0.2727 0.2414 0.2658 0.16 4rzk-a1-m1-cA_4rzk-a1-m1-cB
51 3w1z-a1-m4-cD 110 43 0.2208 0.1545 0.3953 0.22 3w1z-a1-m4-cD_3w1z-a1-m2-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
52 3w1z-a1-m4-cC 130 62 0.2468 0.1462 0.3065 0.31 3w1z-a1-m4-cC_3w1z-a1-m1-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
53 3w1z-a1-m4-cB 143 62 0.2468 0.1329 0.3065 0.35 3w1z-a1-m1-cA_3w1z-a1-m4-cB, 3w1z-a1-m1-cB_3w1z-a1-m4-cB
54 3w1z-a1-m2-cB 143 62 0.2468 0.1329 0.3065 0.35 3w1z-a1-m4-cD_3w1z-a1-m2-cB
55 3w1z-a1-m1-cB 143 62 0.2468 0.1329 0.3065 0.35 3w1z-a1-m1-cB_3w1z-a1-m4-cB, 3w1z-a1-m4-cC_3w1z-a1-m1-cB
56 3w1z-a1-m4-cA 134 62 0.2468 0.1418 0.3065 0.35 3w1z-a1-m2-cA_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cA
57 3w1z-a1-m2-cA 134 62 0.2468 0.1418 0.3065 0.35 3w1z-a1-m2-cA_3w1z-a1-m4-cA
58 3w1z-a1-m1-cA 134 62 0.2468 0.1418 0.3065 0.35 3w1z-a1-m1-cA_3w1z-a1-m4-cB
59 3sgr-a3-m3-cF 25 20 0.1688 0.5200 0.6500 1.1 3sgr-a3-m1-cC_3sgr-a3-m3-cF, 3sgr-a3-m3-cB_3sgr-a3-m3-cF, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
60 3sgr-a3-m3-cE 25 20 0.1688 0.5200 0.6500 1.1 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
61 3sgr-a3-m3-cB 25 20 0.1688 0.5200 0.6500 1.1 3sgr-a3-m1-cD_3sgr-a3-m3-cB, 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cB_3sgr-a3-m3-cF
62 3sgr-a3-m1-cD 25 20 0.1688 0.5200 0.6500 1.1 3sgr-a3-m1-cD_3sgr-a3-m3-cB
63 3sgr-a2-m1-cE 25 20 0.1688 0.5200 0.6500 1.1 3sgr-a2-m1-cA_3sgr-a2-m1-cE
64 3sgr-a2-m1-cB 25 20 0.1688 0.5200 0.6500 1.1 3sgr-a2-m1-cA_3sgr-a2-m1-cB
65 3sgr-a2-m1-cA 25 20 0.1688 0.5200 0.6500 1.1 3sgr-a2-m1-cA_3sgr-a2-m1-cB, 3sgr-a2-m1-cA_3sgr-a2-m1-cE
66 3sgr-a3-m1-cC 24 20 0.1688 0.5417 0.6500 1.1 3sgr-a3-m1-cC_3sgr-a3-m3-cF
67 3msu-a1-m1-cA 415 27 0.1039 0.0193 0.2963 4.1 3msu-a1-m1-cA_3msu-a1-m1-cB
68 3msu-a1-m1-cB 426 27 0.1039 0.0188 0.2963 4.6 3msu-a1-m1-cA_3msu-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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