Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
DRKAVIKNADMPEDLQQDAIDCANQALEKYNIEKDIAAFIKKEFDRKHNPTWHCVVGRNF
GSYVTHETHHFIYFYIGQVAVLLFKSG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3rjs-a1-m2-cA 87 87 1.0000 1.0000 1.0000 8.91e-63 3rjs-a1-m1-cA_3rjs-a1-m2-cA
2 3rjs-a1-m1-cA 87 87 1.0000 1.0000 1.0000 8.91e-63 3rjs-a1-m1-cA_3rjs-a1-m2-cA
3 8glv-a1-m1-cAP 91 85 0.8506 0.8132 0.8706 2.13e-55 8glv-a1-m1-cAN_8glv-a1-m1-cAP
4 8glv-a1-m1-cAN 91 85 0.8506 0.8132 0.8706 2.13e-55 8glv-a1-m1-cAN_8glv-a1-m1-cAP
5 3zke-a3-m1-cK 85 85 0.8161 0.8353 0.8353 6.53e-53 3zke-a3-m1-cI_3zke-a3-m1-cK
6 3zke-a3-m1-cI 85 85 0.8161 0.8353 0.8353 6.53e-53 3zke-a3-m1-cI_3zke-a3-m1-cK
7 5wof-a2-m2-cB 85 84 0.7931 0.8118 0.8214 3.09e-50 5wof-a2-m1-cB_5wof-a2-m2-cB
8 5wof-a2-m1-cB 85 84 0.7931 0.8118 0.8214 3.09e-50 5wof-a2-m1-cB_5wof-a2-m2-cB
9 2v4j-a1-m1-cE 380 38 0.1724 0.0395 0.3947 0.28 2v4j-a1-m1-cB_2v4j-a1-m1-cE
10 2v4j-a1-m1-cB 380 38 0.1724 0.0395 0.3947 0.28 2v4j-a1-m1-cB_2v4j-a1-m1-cE
11 5fx0-a1-m2-cA 98 56 0.2069 0.1837 0.3214 0.70 5fx0-a1-m1-cA_5fx0-a1-m2-cA
12 5fx0-a1-m1-cA 98 56 0.2069 0.1837 0.3214 0.70 5fx0-a1-m1-cA_5fx0-a1-m2-cA
13 8df9-a1-m1-cA 781 35 0.1264 0.0141 0.3143 0.94 8df9-a1-m1-cA_8df9-a1-m1-cB
14 8df9-a1-m1-cB 845 35 0.1264 0.0130 0.3143 0.94 8df9-a1-m1-cA_8df9-a1-m1-cB
15 8df8-a1-m1-cB 850 35 0.1264 0.0129 0.3143 0.94 8df8-a1-m1-cA_8df8-a1-m1-cB
16 8df8-a1-m1-cA 850 35 0.1264 0.0129 0.3143 0.94 8df8-a1-m1-cA_8df8-a1-m1-cB
17 3udc-a1-m1-cG 267 24 0.1149 0.0375 0.4167 1.7 3udc-a1-m1-cB_3udc-a1-m1-cG
18 3udc-a1-m1-cB 267 24 0.1149 0.0375 0.4167 1.7 3udc-a1-m1-cB_3udc-a1-m1-cG
19 6wwa-a2-m1-cC 157 35 0.1264 0.0701 0.3143 2.9 6wwa-a2-m1-cC_6wwa-a2-m1-cD
20 6wwa-a1-m1-cB 149 35 0.1264 0.0738 0.3143 3.1 6wwa-a1-m1-cB_6wwa-a1-m1-cA
21 6wwa-a2-m1-cD 192 35 0.1264 0.0573 0.3143 3.7 6wwa-a2-m1-cC_6wwa-a2-m1-cD
22 6wwa-a1-m1-cA 192 35 0.1264 0.0573 0.3143 3.7 6wwa-a1-m1-cB_6wwa-a1-m1-cA
23 6m7b-a1-m1-cA 201 35 0.1264 0.0547 0.3143 4.5 6m7b-a1-m1-cB_6m7b-a1-m1-cA
24 6m7b-a1-m1-cB 200 35 0.1264 0.0550 0.3143 4.7 6m7b-a1-m1-cB_6m7b-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600