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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
DSKDQTMFYNFGDDSIEEDVKKLMKQVYVALEEKGYNPVNQIVGYLLSGDPAYIPRHKDA
RSMIRRLERDEIIEELVKAYLKNNEIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6tif-a1-m1-cB 87 87 1.0000 1.0000 1.0000 4.61e-60 6tif-a1-m1-cA_6tif-a1-m1-cB
2 6tif-a1-m1-cA 84 84 0.9655 1.0000 1.0000 7.67e-58 6tif-a1-m1-cA_6tif-a1-m1-cB
3 5us5-a1-m1-cB 89 83 0.5977 0.5843 0.6265 3.20e-32 5us5-a1-m1-cA_5us5-a1-m1-cB
4 5us5-a1-m1-cA 89 83 0.5977 0.5843 0.6265 3.20e-32 5us5-a1-m1-cA_5us5-a1-m1-cB
5 7y86-a1-m1-cA 81 74 0.5517 0.5926 0.6486 6.69e-31 7y86-a1-m1-cA_7y86-a1-m1-cB
6 7y86-a1-m1-cB 83 74 0.5517 0.5783 0.6486 7.23e-31 7y86-a1-m1-cA_7y86-a1-m1-cB
7 4hx4-a1-m1-cB 128 54 0.2069 0.1406 0.3333 0.14 4hx4-a1-m1-cA_4hx4-a1-m1-cB
8 4hx4-a1-m1-cA 128 54 0.2069 0.1406 0.3333 0.14 4hx4-a1-m1-cA_4hx4-a1-m1-cB
9 3zw6-a1-m1-cF 263 43 0.1609 0.0532 0.3256 1.3 3zw6-a1-m1-cE_3zw6-a1-m1-cF
10 3zw6-a1-m1-cE 263 43 0.1609 0.0532 0.3256 1.3 3zw6-a1-m1-cE_3zw6-a1-m1-cF
11 5tf0-a1-m1-cB 706 52 0.2069 0.0255 0.3462 3.8 5tf0-a1-m1-cA_5tf0-a1-m1-cB
12 5tf0-a1-m1-cA 706 52 0.2069 0.0255 0.3462 3.8 5tf0-a1-m1-cA_5tf0-a1-m1-cB
13 1wue-a1-m1-cA 370 24 0.1494 0.0351 0.5417 4.1 1wue-a1-m1-cB_1wue-a1-m1-cA
14 1wue-a1-m1-cB 369 24 0.1494 0.0352 0.5417 4.2 1wue-a1-m1-cB_1wue-a1-m1-cA
15 1m46-a2-m2-cA 148 29 0.1264 0.0743 0.3793 6.3 1m46-a2-m1-cA_1m46-a2-m2-cA
16 1m46-a2-m1-cA 148 29 0.1264 0.0743 0.3793 6.3 1m46-a2-m1-cA_1m46-a2-m2-cA
17 4c2k-a2-m1-cC 394 24 0.1149 0.0254 0.4167 7.6 4c2k-a2-m1-cC_4c2k-a2-m1-cD
18 4c2k-a2-m1-cD 399 24 0.1149 0.0251 0.4167 7.6 4c2k-a2-m1-cC_4c2k-a2-m1-cD
19 3e60-a1-m1-cB 420 51 0.1839 0.0381 0.3137 9.6 3e60-a1-m1-cA_3e60-a1-m1-cB
20 3e60-a1-m1-cA 420 51 0.1839 0.0381 0.3137 9.6 3e60-a1-m1-cA_3e60-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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