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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
DSLKAVRLIKFLYQSNPPPNPEGTRQARRNRRRRWRARQRQIHSISERIRSTY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4pmi-a2-m6-cB 53 53 1.0000 1.0000 1.0000 1.02e-32 4pmi-a2-m6-cC_4pmi-a2-m6-cB
2 3lph-a2-m1-cC 58 53 0.9811 0.8966 0.9811 4.61e-32 3lph-a2-m1-cD_3lph-a2-m1-cC
3 3lph-a2-m1-cD 57 53 0.9811 0.9123 0.9811 4.80e-32 3lph-a2-m1-cD_3lph-a2-m1-cC
4 4pmi-a2-m6-cC 52 51 0.9623 0.9808 1.0000 5.61e-31 4pmi-a2-m6-cC_4pmi-a2-m6-cB
5 6bsy-a1-m1-cA 58 53 0.9434 0.8621 0.9434 4.14e-18 6bsy-a1-m1-cB_6bsy-a1-m1-cA
6 6bsy-a1-m1-cB 55 53 0.9434 0.9091 0.9434 4.25e-18 6bsy-a1-m1-cB_6bsy-a1-m1-cA
7 5jxl-a1-m9-cA 851 38 0.2642 0.0165 0.3684 7.7 5jxl-a1-m3-cA_5jxl-a1-m9-cA, 5jxl-a1-m4-cA_5jxl-a1-m9-cA
8 5jxl-a1-m4-cA 851 38 0.2642 0.0165 0.3684 7.7 5jxl-a1-m4-cA_5jxl-a1-m9-cA
9 5jxl-a1-m3-cA 851 38 0.2642 0.0165 0.3684 7.7 5jxl-a1-m3-cA_5jxl-a1-m9-cA
10 5jxl-a1-m11-cA 851 38 0.2642 0.0165 0.3684 7.7 5jxl-a1-m1-cA_5jxl-a1-m11-cA
11 5jxl-a1-m1-cA 851 38 0.2642 0.0165 0.3684 7.7 5jxl-a1-m1-cA_5jxl-a1-m11-cA

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Reference:
Jacob Schwartz et al.

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