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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
DSNTITSFQVDCYLWHIRKLLSMRDMCDAPFDDRLRRDQKALKGRGSTLGLDLRVATMEG
KKIVEDILKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6sx0-a1-m1-cB 71 70 1.0000 0.9859 1.0000 3.27e-47 6sx0-a1-m1-cA_6sx0-a1-m1-cB
2 6sx0-a1-m1-cA 70 70 1.0000 1.0000 1.0000 3.66e-47 6sx0-a1-m1-cA_6sx0-a1-m1-cB
3 1ail-a1-m2-cA 70 69 0.6571 0.6571 0.6667 1.93e-30 1ail-a1-m1-cA_1ail-a1-m2-cA
4 1ail-a1-m1-cA 70 69 0.6571 0.6571 0.6667 1.93e-30 1ail-a1-m1-cA_1ail-a1-m2-cA
5 5h5n-a1-m1-cB 71 66 0.5571 0.5493 0.5909 6.69e-25 5h5n-a1-m1-cA_5h5n-a1-m1-cB
6 5h5n-a1-m1-cA 71 66 0.5571 0.5493 0.5909 6.69e-25 5h5n-a1-m1-cA_5h5n-a1-m1-cB
7 3cu5-a1-m1-cA 124 38 0.2143 0.1210 0.3947 0.39 3cu5-a1-m1-cA_3cu5-a1-m1-cB
8 4nom-a1-m2-cA 407 39 0.1714 0.0295 0.3077 0.40 4nom-a1-m1-cA_4nom-a1-m2-cA
9 4nom-a1-m1-cA 407 39 0.1714 0.0295 0.3077 0.40 4nom-a1-m1-cA_4nom-a1-m2-cA
10 3cu5-a1-m1-cB 129 38 0.2143 0.1163 0.3947 0.42 3cu5-a1-m1-cA_3cu5-a1-m1-cB
11 2cgz-a1-m6-cA 100 18 0.1286 0.0900 0.5000 0.74 2cgz-a1-m5-cA_2cgz-a1-m6-cA
12 2cgz-a1-m5-cA 100 18 0.1286 0.0900 0.5000 0.74 2cgz-a1-m5-cA_2cgz-a1-m6-cA
13 3hq9-a1-m1-cB 306 26 0.1857 0.0425 0.5000 1.9 3hq9-a1-m1-cB_3hq9-a1-m1-cA
14 3hq9-a1-m1-cA 312 26 0.1857 0.0417 0.5000 1.9 3hq9-a1-m1-cB_3hq9-a1-m1-cA
15 3ewn-a1-m2-cA 228 30 0.1571 0.0482 0.3667 2.9 3ewn-a1-m1-cA_3ewn-a1-m2-cA
16 3ewn-a1-m1-cA 228 30 0.1571 0.0482 0.3667 2.9 3ewn-a1-m1-cA_3ewn-a1-m2-cA
17 3r8r-a2-m1-cN 202 36 0.2000 0.0693 0.3889 7.1 3r8r-a2-m1-cN_3r8r-a2-m1-cW

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Reference:
Jacob Schwartz et al.

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