Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=58)
DTRREIYKHIVKSPGLHERQLAKELDVPLSTLVYHLHYLERRELIKSDERYARYYATK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5duk-a1-m1-cB 65 58 1.0000 0.8923 1.0000 1.49e-36 5duk-a1-m1-cA_5duk-a1-m1-cB
2 5duk-a1-m1-cA 58 58 1.0000 1.0000 1.0000 2.18e-36 5duk-a1-m1-cA_5duk-a1-m1-cB
3 3hta-a1-m1-cB 179 46 0.2931 0.0950 0.3696 0.016 3hta-a1-m1-cB_3hta-a1-m1-cA
4 3hta-a1-m1-cA 190 46 0.2931 0.0895 0.3696 0.019 3hta-a1-m1-cB_3hta-a1-m1-cA
5 3f6o-a1-m1-cB 91 46 0.2414 0.1538 0.3043 0.027 3f6o-a1-m1-cB_3f6o-a1-m1-cA
6 3f6o-a2-m2-cA 97 46 0.2414 0.1443 0.3043 0.028 3f6o-a2-m1-cA_3f6o-a2-m2-cA
7 3f6o-a2-m1-cA 97 46 0.2414 0.1443 0.3043 0.028 3f6o-a2-m1-cA_3f6o-a2-m2-cA
8 3f6o-a1-m1-cA 97 46 0.2414 0.1443 0.3043 0.028 3f6o-a1-m1-cB_3f6o-a1-m1-cA
9 6jbx-a1-m1-cB 143 54 0.3276 0.1329 0.3519 0.17 6jbx-a1-m1-cB_6jbx-a1-m1-cA
10 6jbx-a1-m1-cA 146 54 0.3276 0.1301 0.3519 0.20 6jbx-a1-m1-cB_6jbx-a1-m1-cA
11 2yx7-a1-m8-cA 150 28 0.1897 0.0733 0.3929 2.4 2yx7-a1-m2-cA_2yx7-a1-m8-cA, 2yx7-a1-m4-cA_2yx7-a1-m8-cA, 2yx7-a1-m6-cA_2yx7-a1-m8-cA
12 2yx7-a1-m6-cA 150 28 0.1897 0.0733 0.3929 2.4 2yx7-a1-m6-cA_2yx7-a1-m8-cA
13 2yx7-a1-m4-cA 150 28 0.1897 0.0733 0.3929 2.4 2yx7-a1-m4-cA_2yx7-a1-m8-cA
14 2yx7-a1-m2-cA 150 28 0.1897 0.0733 0.3929 2.4 2yx7-a1-m2-cA_2yx7-a1-m8-cA
15 3ozb-a1-m1-cC 239 24 0.1897 0.0460 0.4583 4.0 3ozb-a1-m1-cC_3ozb-a1-m1-cF
16 3ozb-a1-m1-cE 236 24 0.1897 0.0466 0.4583 4.1 3ozb-a1-m1-cE_3ozb-a1-m1-cD
17 3ozb-a1-m1-cF 239 24 0.1897 0.0460 0.4583 4.1 3ozb-a1-m1-cC_3ozb-a1-m1-cF
18 3ozb-a1-m1-cD 239 24 0.1897 0.0460 0.4583 4.1 3ozb-a1-m1-cE_3ozb-a1-m1-cD
19 4fht-a1-m1-cA 141 40 0.1897 0.0780 0.2750 5.9 4fht-a1-m1-cA_4fht-a1-m1-cB
20 4g9y-a1-m2-cA 136 40 0.1897 0.0809 0.2750 6.0 4g9y-a1-m1-cA_4g9y-a1-m2-cA
21 4g9y-a1-m1-cA 136 40 0.1897 0.0809 0.2750 6.0 4g9y-a1-m1-cA_4g9y-a1-m2-cA
22 1jmu-a1-m1-cF 608 25 0.1724 0.0164 0.4000 6.7 1jmu-a1-m1-cD_1jmu-a1-m1-cF
23 1jmu-a1-m1-cD 608 25 0.1724 0.0164 0.4000 6.7 1jmu-a1-m1-cD_1jmu-a1-m1-cF
24 2cse-a1-m9-cT 641 25 0.1724 0.0156 0.4000 6.7 2cse-a1-m51-cQ_2cse-a1-m9-cT, 2cse-a1-m57-cR_2cse-a1-m9-cT
25 2cse-a1-m9-cR 641 25 0.1724 0.0156 0.4000 6.7 2cse-a1-m9-cQ_2cse-a1-m9-cR
26 2cse-a1-m9-cQ 641 25 0.1724 0.0156 0.4000 6.7 2cse-a1-m9-cQ_2cse-a1-m9-cR
27 2cse-a1-m57-cR 641 25 0.1724 0.0156 0.4000 6.7 2cse-a1-m57-cR_2cse-a1-m9-cT
28 2cse-a1-m51-cQ 641 25 0.1724 0.0156 0.4000 6.7 2cse-a1-m51-cQ_2cse-a1-m9-cT
29 4fht-a1-m1-cB 142 40 0.1897 0.0775 0.2750 7.0 4fht-a1-m1-cA_4fht-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600