Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=27)
DTYYLQVRGRENFEILMKLKESLELME

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2wqj-a5-m1-cZ 31 27 1.0000 0.8710 1.0000 2.87e-13 2wqj-a5-m1-c1_2wqj-a5-m1-cZ, 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
2 2wqj-a4-m1-cP 28 27 1.0000 0.9643 1.0000 3.30e-13 2wqj-a4-m1-cO_2wqj-a4-m1-cP
3 2wqj-a5-m1-c2 27 27 1.0000 1.0000 1.0000 3.30e-13 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
4 2wqj-a4-m1-cO 27 27 1.0000 1.0000 1.0000 3.30e-13 2wqj-a4-m1-cO_2wqj-a4-m1-cP
5 2wqj-a1-m1-cJ 27 27 1.0000 1.0000 1.0000 3.30e-13 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
6 2nb1-a1-m1-cD 50 27 0.9630 0.5200 0.9630 9.92e-13 2nb1-a1-m1-cB_2nb1-a1-m1-cD
7 2nb1-a1-m1-cB 50 27 0.9630 0.5200 0.9630 9.92e-13 2nb1-a1-m1-cB_2nb1-a1-m1-cD
8 2wqj-a5-m1-c1 26 26 0.9630 1.0000 1.0000 3.40e-12 2wqj-a5-m1-c1_2wqj-a5-m1-cZ
9 2wqj-a1-m1-cL 26 26 0.9630 1.0000 1.0000 3.40e-12 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
10 5hob-a1-m1-cB 45 27 0.8889 0.5333 0.8889 2.72e-11 5hob-a1-m1-cB_5hob-a1-m1-cC
11 5hob-a1-m1-cC 46 27 0.8889 0.5217 0.8889 3.13e-11 5hob-a1-m1-cB_5hob-a1-m1-cC
12 2wtt-a4-m1-cO 39 25 0.8889 0.6154 0.9600 2.81e-09 2wtt-a4-m1-cM_2wtt-a4-m1-cO
13 2wtt-a2-m1-cB 41 25 0.8889 0.5854 0.9600 2.92e-09 2wtt-a2-m1-cA_2wtt-a2-m1-cB
14 2wtt-a2-m1-cA 40 25 0.8889 0.6000 0.9600 3.13e-09 2wtt-a2-m1-cA_2wtt-a2-m1-cB
15 2wtt-a4-m1-cM 27 25 0.8889 0.8889 0.9600 3.62e-09 2wtt-a4-m1-cM_2wtt-a4-m1-cO
16 7z73-a1-m1-cC 44 24 0.6296 0.3864 0.7083 2.06e-06 7z73-a1-m1-cD_7z73-a1-m1-cC
17 7z73-a1-m1-cD 43 24 0.6296 0.3953 0.7083 2.09e-06 7z73-a1-m1-cD_7z73-a1-m1-cC
18 4a9z-a1-m1-cB 45 24 0.6296 0.3778 0.7083 2.10e-06 4a9z-a1-m1-cB_4a9z-a1-m1-cC
19 3zy1-a1-m4-cA 40 24 0.6296 0.4250 0.7083 2.13e-06 3zy1-a1-m1-cA_3zy1-a1-m4-cA, 3zy1-a1-m2-cA_3zy1-a1-m4-cA
20 3zy1-a1-m2-cA 40 24 0.6296 0.4250 0.7083 2.13e-06 3zy1-a1-m2-cA_3zy1-a1-m4-cA
21 3zy1-a1-m1-cA 40 24 0.6296 0.4250 0.7083 2.13e-06 3zy1-a1-m1-cA_3zy1-a1-m4-cA
22 4a9z-a1-m1-cC 58 24 0.6296 0.2931 0.7083 2.30e-06 4a9z-a1-m1-cB_4a9z-a1-m1-cC
23 2nb1-a1-m1-cC 60 24 0.5926 0.2667 0.6667 1.05e-05 2nb1-a1-m1-cA_2nb1-a1-m1-cC
24 2nb1-a1-m1-cA 60 24 0.5926 0.2667 0.6667 1.05e-05 2nb1-a1-m1-cA_2nb1-a1-m1-cC
25 4d1l-a2-m2-cB 37 25 0.5926 0.4324 0.6400 8.63e-05 4d1l-a2-m2-cB_4d1l-a2-m1-cA, 4d1l-a2-m2-cB_4d1l-a2-m2-cA
26 4d1l-a2-m2-cA 38 25 0.5926 0.4211 0.6400 9.17e-05 4d1l-a2-m2-cB_4d1l-a2-m2-cA
27 4d1l-a2-m1-cA 38 25 0.5926 0.4211 0.6400 9.17e-05 4d1l-a2-m2-cB_4d1l-a2-m1-cA
28 4cz6-a1-m1-cB 29 27 0.5926 0.5517 0.5926 1.10e-04 4cz6-a1-m1-cC_4cz6-a1-m1-cB
29 4cz6-a1-m1-cC 27 25 0.5926 0.5926 0.6400 1.16e-04 4cz6-a1-m1-cC_4cz6-a1-m1-cB
30 5xzc-a2-m1-cE 232 25 0.4815 0.0560 0.5200 0.001 5xzc-a2-m1-cC_5xzc-a2-m1-cE
31 5xzc-a2-m1-cD 232 25 0.4815 0.0560 0.5200 0.001 5xzc-a2-m1-cB_5xzc-a2-m1-cD
32 5xzc-a2-m1-cC 232 25 0.4815 0.0560 0.5200 0.001 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cC_5xzc-a2-m1-cE
33 5xzc-a2-m1-cB 232 25 0.4815 0.0560 0.5200 0.001 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cB_5xzc-a2-m1-cD
34 3zy0-a1-m1-cB 25 22 0.5926 0.6400 0.7273 0.002 3zy0-a1-m1-cD_3zy0-a1-m1-cB
35 3zy0-a1-m1-cD 24 22 0.5926 0.6667 0.7273 0.002 3zy0-a1-m1-cD_3zy0-a1-m1-cB
36 2j10-a1-m1-cC 31 23 0.4444 0.3871 0.5217 0.003 2j10-a1-m1-cB_2j10-a1-m1-cC
37 2j10-a1-m1-cB 31 23 0.4444 0.3871 0.5217 0.003 2j10-a1-m1-cB_2j10-a1-m1-cC
38 1pet-a1-m1-cD 31 23 0.4815 0.4194 0.5652 0.003 1pet-a1-m1-cA_1pet-a1-m1-cD
39 1pet-a1-m1-cA 31 23 0.4815 0.4194 0.5652 0.003 1pet-a1-m1-cA_1pet-a1-m1-cD
40 1sak-a1-m1-cD 42 23 0.4815 0.3095 0.5652 0.003 1sak-a1-m1-cB_1sak-a1-m1-cD, 1sak-a1-m1-cC_1sak-a1-m1-cD
41 1sak-a1-m1-cC 42 23 0.4815 0.3095 0.5652 0.003 1sak-a1-m1-cC_1sak-a1-m1-cD
42 1sak-a1-m1-cB 42 23 0.4815 0.3095 0.5652 0.003 1sak-a1-m1-cB_1sak-a1-m1-cD
43 1a1u-a1-m1-cC 29 23 0.4444 0.4138 0.5217 0.055 1a1u-a1-m1-cA_1a1u-a1-m1-cC
44 1a1u-a1-m1-cA 29 23 0.4444 0.4138 0.5217 0.055 1a1u-a1-m1-cA_1a1u-a1-m1-cC
45 1hs5-a1-m1-cB 34 25 0.4444 0.3529 0.4800 0.059 1hs5-a1-m1-cA_1hs5-a1-m1-cB
46 1hs5-a1-m1-cA 34 25 0.4444 0.3529 0.4800 0.059 1hs5-a1-m1-cA_1hs5-a1-m1-cB
47 3q01-a1-m1-cB 233 25 0.4444 0.0515 0.4800 0.061 3q01-a1-m1-cA_3q01-a1-m1-cB
48 3q01-a1-m1-cA 233 25 0.4444 0.0515 0.4800 0.061 3q01-a1-m1-cA_3q01-a1-m1-cB
49 2mw4-a1-m1-cD 47 26 0.3704 0.2128 0.3846 0.20 2mw4-a1-m1-cA_2mw4-a1-m1-cD, 2mw4-a1-m1-cB_2mw4-a1-m1-cD, 2mw4-a1-m1-cC_2mw4-a1-m1-cD
50 2mw4-a1-m1-cC 47 26 0.3704 0.2128 0.3846 0.20 2mw4-a1-m1-cC_2mw4-a1-m1-cD
51 2mw4-a1-m1-cB 47 26 0.3704 0.2128 0.3846 0.20 2mw4-a1-m1-cB_2mw4-a1-m1-cD
52 2mw4-a1-m1-cA 47 26 0.3704 0.2128 0.3846 0.20 2mw4-a1-m1-cA_2mw4-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600