Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=45)
DTYYLQVRGRKNFEILMELKRSLELMELVPQPLVDSYEQQQQLLQ

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 5hob-a1-m1-cB 45 45 1.0000 1.0000 1.0000 3.63e-26 5hob-a1-m1-cB_5hob-a1-m1-cC
2 5hob-a1-m1-cC 46 45 1.0000 0.9783 1.0000 4.01e-26 5hob-a1-m1-cB_5hob-a1-m1-cC
3 2nb1-a1-m1-cD 50 37 0.7778 0.7000 0.9459 1.19e-19 2nb1-a1-m1-cB_2nb1-a1-m1-cD
4 2nb1-a1-m1-cB 50 37 0.7778 0.7000 0.9459 1.19e-19 2nb1-a1-m1-cB_2nb1-a1-m1-cD
5 2wtt-a2-m1-cB 41 42 0.8000 0.8780 0.8571 4.59e-16 2wtt-a2-m1-cA_2wtt-a2-m1-cB
6 2wtt-a4-m1-cO 39 41 0.7778 0.8974 0.8537 1.71e-15 2wtt-a4-m1-cM_2wtt-a4-m1-cO
7 2wtt-a2-m1-cA 40 41 0.7778 0.8750 0.8537 2.01e-15 2wtt-a2-m1-cA_2wtt-a2-m1-cB
8 2wqj-a5-m1-cZ 31 31 0.6222 0.9032 0.9032 4.01e-14 2wqj-a5-m1-c1_2wqj-a5-m1-cZ, 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
9 2wqj-a4-m1-cP 28 28 0.5556 0.8929 0.8929 1.37e-11 2wqj-a4-m1-cO_2wqj-a4-m1-cP
10 2wqj-a5-m1-c2 27 27 0.5333 0.8889 0.8889 4.53e-11 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
11 2wqj-a4-m1-cO 27 27 0.5333 0.8889 0.8889 4.53e-11 2wqj-a4-m1-cO_2wqj-a4-m1-cP
12 2wqj-a1-m1-cJ 27 27 0.5333 0.8889 0.8889 4.53e-11 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
13 2wqj-a5-m1-c1 26 26 0.5111 0.8846 0.8846 4.66e-10 2wqj-a5-m1-c1_2wqj-a5-m1-cZ
14 2wqj-a1-m1-cL 26 26 0.5111 0.8846 0.8846 4.66e-10 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
15 7z73-a1-m1-cD 43 39 0.4667 0.4884 0.5385 1.66e-09 7z73-a1-m1-cD_7z73-a1-m1-cC
16 4a9z-a1-m1-cB 45 39 0.4667 0.4667 0.5385 1.75e-09 4a9z-a1-m1-cB_4a9z-a1-m1-cC
17 7z73-a1-m1-cC 44 39 0.4667 0.4773 0.5385 1.77e-09 7z73-a1-m1-cD_7z73-a1-m1-cC
18 2nb1-a1-m1-cC 60 34 0.4000 0.3000 0.5294 1.17e-07 2nb1-a1-m1-cA_2nb1-a1-m1-cC
19 2nb1-a1-m1-cA 60 34 0.4000 0.3000 0.5294 1.17e-07 2nb1-a1-m1-cA_2nb1-a1-m1-cC
20 3zy1-a1-m4-cA 40 36 0.4000 0.4500 0.5000 1.27e-07 3zy1-a1-m1-cA_3zy1-a1-m4-cA, 3zy1-a1-m2-cA_3zy1-a1-m4-cA
21 3zy1-a1-m2-cA 40 36 0.4000 0.4500 0.5000 1.27e-07 3zy1-a1-m2-cA_3zy1-a1-m4-cA
22 3zy1-a1-m1-cA 40 36 0.4000 0.4500 0.5000 1.27e-07 3zy1-a1-m1-cA_3zy1-a1-m4-cA
23 4a9z-a1-m1-cC 58 34 0.3778 0.2931 0.5000 5.61e-07 4a9z-a1-m1-cB_4a9z-a1-m1-cC
24 2wtt-a4-m1-cM 27 25 0.4667 0.7778 0.8400 6.18e-07 2wtt-a4-m1-cM_2wtt-a4-m1-cO
25 4d1l-a2-m2-cB 37 35 0.3778 0.4595 0.4857 3.18e-05 4d1l-a2-m2-cB_4d1l-a2-m1-cA, 4d1l-a2-m2-cB_4d1l-a2-m2-cA
26 4d1l-a2-m2-cA 38 35 0.3778 0.4474 0.4857 3.42e-05 4d1l-a2-m2-cB_4d1l-a2-m2-cA
27 4d1l-a2-m1-cA 38 35 0.3778 0.4474 0.4857 3.42e-05 4d1l-a2-m2-cB_4d1l-a2-m1-cA
28 4cz6-a1-m1-cB 29 29 0.3333 0.5172 0.5172 0.003 4cz6-a1-m1-cC_4cz6-a1-m1-cB
29 4cz6-a1-m1-cC 27 25 0.3111 0.5185 0.5600 0.016 4cz6-a1-m1-cC_4cz6-a1-m1-cB
30 2mw4-a1-m1-cD 47 42 0.2889 0.2766 0.3095 0.024 2mw4-a1-m1-cA_2mw4-a1-m1-cD, 2mw4-a1-m1-cB_2mw4-a1-m1-cD, 2mw4-a1-m1-cC_2mw4-a1-m1-cD
31 2mw4-a1-m1-cC 47 42 0.2889 0.2766 0.3095 0.024 2mw4-a1-m1-cC_2mw4-a1-m1-cD
32 2mw4-a1-m1-cB 47 42 0.2889 0.2766 0.3095 0.024 2mw4-a1-m1-cB_2mw4-a1-m1-cD
33 2mw4-a1-m1-cA 47 42 0.2889 0.2766 0.3095 0.024 2mw4-a1-m1-cA_2mw4-a1-m1-cD
34 2j10-a1-m1-cC 31 23 0.2444 0.3548 0.4783 0.025 2j10-a1-m1-cB_2j10-a1-m1-cC
35 2j10-a1-m1-cB 31 23 0.2444 0.3548 0.4783 0.025 2j10-a1-m1-cB_2j10-a1-m1-cC
36 1pet-a1-m1-cD 31 23 0.2667 0.3871 0.5217 0.033 1pet-a1-m1-cA_1pet-a1-m1-cD
37 1pet-a1-m1-cA 31 23 0.2667 0.3871 0.5217 0.033 1pet-a1-m1-cA_1pet-a1-m1-cD
38 5xzc-a2-m1-cE 232 25 0.2667 0.0517 0.4800 0.034 5xzc-a2-m1-cC_5xzc-a2-m1-cE
39 5xzc-a2-m1-cD 232 25 0.2667 0.0517 0.4800 0.034 5xzc-a2-m1-cB_5xzc-a2-m1-cD
40 5xzc-a2-m1-cC 232 25 0.2667 0.0517 0.4800 0.034 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cC_5xzc-a2-m1-cE
41 5xzc-a2-m1-cB 232 25 0.2667 0.0517 0.4800 0.034 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cB_5xzc-a2-m1-cD
42 1sak-a1-m1-cD 42 23 0.2667 0.2857 0.5217 0.038 1sak-a1-m1-cB_1sak-a1-m1-cD, 1sak-a1-m1-cC_1sak-a1-m1-cD
43 1sak-a1-m1-cC 42 23 0.2667 0.2857 0.5217 0.038 1sak-a1-m1-cC_1sak-a1-m1-cD
44 1sak-a1-m1-cB 42 23 0.2667 0.2857 0.5217 0.038 1sak-a1-m1-cB_1sak-a1-m1-cD
45 1a1u-a1-m1-cC 29 23 0.2444 0.3793 0.4783 0.60 1a1u-a1-m1-cA_1a1u-a1-m1-cC
46 1a1u-a1-m1-cA 29 23 0.2444 0.3793 0.4783 0.60 1a1u-a1-m1-cA_1a1u-a1-m1-cC
47 3zy0-a1-m1-cB 25 22 0.2889 0.5200 0.5909 0.64 3zy0-a1-m1-cD_3zy0-a1-m1-cB
48 3zy0-a1-m1-cD 24 22 0.2889 0.5417 0.5909 0.65 3zy0-a1-m1-cD_3zy0-a1-m1-cB
49 1hs5-a1-m1-cB 34 25 0.2444 0.3235 0.4400 0.97 1hs5-a1-m1-cA_1hs5-a1-m1-cB
50 1hs5-a1-m1-cA 34 25 0.2444 0.3235 0.4400 0.97 1hs5-a1-m1-cA_1hs5-a1-m1-cB
51 3q01-a1-m1-cB 233 25 0.2444 0.0472 0.4400 2.2 3q01-a1-m1-cA_3q01-a1-m1-cB
52 3q01-a1-m1-cA 233 25 0.2444 0.0472 0.4400 2.2 3q01-a1-m1-cA_3q01-a1-m1-cB
53 1sw6-a1-m1-cA 254 25 0.2000 0.0354 0.3600 2.8 1sw6-a1-m1-cA_1sw6-a1-m1-cB
54 1sw6-a1-m1-cB 254 25 0.2000 0.0354 0.3600 3.0 1sw6-a1-m1-cA_1sw6-a1-m1-cB
55 8f7c-a1-m1-cG 287 42 0.3333 0.0523 0.3571 5.1 8f7c-a1-m1-cF_8f7c-a1-m1-cG
56 8f7c-a1-m1-cF 287 42 0.3333 0.0523 0.3571 5.1 8f7c-a1-m1-cF_8f7c-a1-m1-cG
57 7xlb-a1-m1-cG 336 42 0.3333 0.0446 0.3571 6.1 7xlb-a1-m1-cF_7xlb-a1-m1-cG
58 7xlb-a1-m1-cF 336 42 0.3333 0.0446 0.3571 6.1 7xlb-a1-m1-cF_7xlb-a1-m1-cG

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600