Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
DVRHHFTPSERQLCLSSIQTAFNQGAGTCTLSDSGRISYTVEFSLPTHHTVRLIRVT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1p65-a1-m1-cB 57 57 1.0000 1.0000 1.0000 2.91e-37 1p65-a1-m1-cA_1p65-a1-m1-cB
2 1p65-a1-m1-cA 57 57 1.0000 1.0000 1.0000 2.91e-37 1p65-a1-m1-cA_1p65-a1-m1-cB
3 3wa6-a2-m2-cA 466 15 0.1930 0.0236 0.7333 1.1 3wa6-a2-m1-cA_3wa6-a2-m2-cA
4 3wa6-a2-m1-cA 466 15 0.1930 0.0236 0.7333 1.1 3wa6-a2-m1-cA_3wa6-a2-m2-cA
5 3pmi-a5-m2-cB 119 26 0.1754 0.0840 0.3846 2.4 3pmi-a5-m1-cA_3pmi-a5-m2-cB, 3pmi-a5-m1-cC_3pmi-a5-m2-cB
6 3pmi-a5-m1-cA 119 26 0.1754 0.0840 0.3846 2.4 3pmi-a5-m1-cA_3pmi-a5-m2-cB, 3pmi-a5-m1-cC_3pmi-a5-m1-cA
7 3pmi-a5-m1-cC 118 26 0.1754 0.0847 0.3846 2.4 3pmi-a5-m1-cC_3pmi-a5-m1-cA, 3pmi-a5-m1-cC_3pmi-a5-m2-cB
8 3ewb-a1-m2-cX 268 37 0.1930 0.0410 0.2973 7.8 3ewb-a1-m1-cX_3ewb-a1-m2-cX
9 3ewb-a1-m1-cX 268 37 0.1930 0.0410 0.2973 7.8 3ewb-a1-m1-cX_3ewb-a1-m2-cX
10 4aj5-a1-m1-cS 107 24 0.1579 0.0841 0.3750 8.4 4aj5-a1-m1-cS_4aj5-a1-m1-cT

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600