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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
DVSGTVCLSALPPEATDTLNLIAADGPFPYSQDGVVFQNRESVLPTQSYGYYHEYTVITP
GARTRGTRRIITGEATQEDYYTGDHYATFSLIDQTC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4gho-a1-m2-cB 96 96 1.0000 1.0000 1.0000 1.58e-67 4gho-a1-m1-cA_4gho-a1-m2-cB
2 4gho-a1-m1-cA 96 96 1.0000 1.0000 1.0000 1.58e-67 4gho-a1-m1-cA_4gho-a1-m2-cB
3 1rge-a1-m1-cB 96 96 0.9896 0.9896 0.9896 3.97e-67 1rge-a1-m1-cA_1rge-a1-m1-cB
4 1rge-a1-m1-cA 96 96 0.9896 0.9896 0.9896 3.97e-67 1rge-a1-m1-cA_1rge-a1-m1-cB
5 3kch-a3-m4-cC 108 60 0.2292 0.2037 0.3667 1.2 3kch-a3-m1-cC_3kch-a3-m4-cC
6 3kch-a3-m1-cC 108 60 0.2292 0.2037 0.3667 1.2 3kch-a3-m1-cC_3kch-a3-m4-cC
7 2f56-a4-m2-cC 108 60 0.2292 0.2037 0.3667 1.2 2f56-a4-m1-cA_2f56-a4-m2-cC
8 2f56-a4-m1-cA 108 60 0.2292 0.2037 0.3667 1.2 2f56-a4-m1-cA_2f56-a4-m2-cC
9 1yvs-a2-m6-cA 108 60 0.2292 0.2037 0.3667 1.2 1yvs-a2-m3-cA_1yvs-a2-m6-cA, 1yvs-a2-m5-cA_1yvs-a2-m6-cA
10 1yvs-a2-m5-cA 108 60 0.2292 0.2037 0.3667 1.2 1yvs-a2-m5-cA_1yvs-a2-m6-cA
11 1yvs-a2-m3-cA 108 60 0.2292 0.2037 0.3667 1.2 1yvs-a2-m3-cA_1yvs-a2-m6-cA
12 1ucr-a1-m1-cA 74 54 0.1458 0.1892 0.2593 8.3 1ucr-a1-m1-cA_1ucr-a1-m1-cB
13 1ucr-a1-m1-cB 75 54 0.1458 0.1867 0.2593 8.6 1ucr-a1-m1-cA_1ucr-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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