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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
DVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSETFQKVKEKLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6dvu-a1-m2-cB 53 52 1.0000 0.9811 1.0000 6.15e-31 6dvu-a1-m1-cA_6dvu-a1-m2-cB
2 6dz6-a1-m1-cA 52 52 1.0000 1.0000 1.0000 6.20e-31 6dz6-a1-m1-cB_6dz6-a1-m1-cA
3 6nf3-a1-m2-cB 51 51 0.9808 1.0000 1.0000 4.89e-30 6nf3-a1-m1-cA_6nf3-a1-m2-cB
4 6dvu-a1-m1-cA 51 50 0.9615 0.9804 1.0000 3.06e-29 6dvu-a1-m1-cA_6dvu-a1-m2-cB
5 6dz6-a1-m1-cB 50 50 0.9615 1.0000 1.0000 3.13e-29 6dz6-a1-m1-cB_6dz6-a1-m1-cA
6 6nf3-a1-m1-cA 46 46 0.8846 1.0000 1.0000 1.13e-26 6nf3-a1-m1-cA_6nf3-a1-m2-cB
7 1nzc-a1-m1-cB 196 39 0.2692 0.0714 0.3590 2.8 1nzc-a1-m1-cA_1nzc-a1-m1-cB
8 1nzc-a1-m1-cA 196 39 0.2692 0.0714 0.3590 2.8 1nzc-a1-m1-cA_1nzc-a1-m1-cB
9 2fck-a1-m2-cA 171 25 0.1923 0.0585 0.4000 3.2 2fck-a1-m1-cA_2fck-a1-m2-cA
10 2fck-a1-m1-cA 171 25 0.1923 0.0585 0.4000 3.2 2fck-a1-m1-cA_2fck-a1-m2-cA
11 6oaw-a1-m1-cB 382 41 0.2500 0.0340 0.3171 7.4 6oaw-a1-m1-cA_6oaw-a1-m1-cB
12 3drw-a1-m1-cA 460 20 0.1731 0.0196 0.4500 8.7 3drw-a1-m1-cB_3drw-a1-m1-cA
13 3drw-a1-m1-cB 450 20 0.1731 0.0200 0.4500 9.0 3drw-a1-m1-cB_3drw-a1-m1-cA
14 3m5p-a1-m2-cA 532 16 0.2115 0.0207 0.6875 9.3 3m5p-a1-m1-cA_3m5p-a1-m2-cA
15 3m5p-a1-m1-cA 532 16 0.2115 0.0207 0.6875 9.3 3m5p-a1-m1-cA_3m5p-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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