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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
DWKQPELESDEHGKTLRLTLPEGLSGEQKSQWMLTIKAVVQSAKHWNLAECTFEASGEGV
IIKKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2fqm-a1-m1-cA 65 65 1.0000 1.0000 1.0000 2.41e-43 2fqm-a1-m1-cB_2fqm-a1-m1-cA
2 2fqm-a1-m1-cB 63 63 0.9692 1.0000 1.0000 2.25e-41 2fqm-a1-m1-cB_2fqm-a1-m1-cA
3 1du5-a1-m1-cB 206 28 0.1692 0.0534 0.3929 0.40 1du5-a1-m1-cA_1du5-a1-m1-cB
4 1du5-a1-m1-cA 206 28 0.1692 0.0534 0.3929 0.40 1du5-a1-m1-cA_1du5-a1-m1-cB
5 1thw-a1-m2-cA 207 36 0.1692 0.0531 0.3056 1.1 1thw-a1-m1-cA_1thw-a1-m2-cA
6 1thw-a1-m1-cA 207 36 0.1692 0.0531 0.3056 1.1 1thw-a1-m1-cA_1thw-a1-m2-cA
7 3qmj-a1-m3-cA 211 54 0.2154 0.0664 0.2593 1.4 3qmj-a1-m2-cA_3qmj-a1-m3-cA
8 3qmj-a1-m2-cA 211 54 0.2154 0.0664 0.2593 1.4 3qmj-a1-m2-cA_3qmj-a1-m3-cA
9 5tuu-a2-m2-cB 106 22 0.1538 0.0943 0.4545 2.7 5tuu-a2-m1-cB_5tuu-a2-m2-cB
10 5tuu-a2-m1-cB 106 22 0.1538 0.0943 0.4545 2.7 5tuu-a2-m1-cB_5tuu-a2-m2-cB
11 3hp0-a8-m1-cF 244 33 0.1846 0.0492 0.3636 8.2 3hp0-a8-m1-cD_3hp0-a8-m1-cF
12 3hp0-a8-m1-cD 244 33 0.1846 0.0492 0.3636 8.2 3hp0-a8-m1-cD_3hp0-a8-m1-cF

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Reference:
Jacob Schwartz et al.

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