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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
DYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALCETFIEKEDLEEKFESFAK
ALRIDEELQQKIESRKTDIVIQSMANILSGL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3mli-a3-m1-cD 94 91 1.0000 0.9681 1.0000 5.25e-60 3mli-a3-m2-cA_3mli-a3-m1-cD
2 3mli-a3-m2-cA 91 91 1.0000 1.0000 1.0000 5.34e-60 3mli-a3-m2-cA_3mli-a3-m1-cD
3 3mlg-a3-m2-cB 161 81 0.8791 0.4969 0.9877 1.64e-50 3mlg-a3-m1-cA_3mlg-a3-m2-cB
4 3mlg-a3-m2-cB 161 80 0.8681 0.4907 0.9875 2.61e-49 3mlg-a3-m1-cA_3mlg-a3-m2-cB
5 3mlg-a3-m1-cA 161 81 0.8791 0.4969 0.9877 1.64e-50 3mlg-a3-m1-cA_3mlg-a3-m2-cB
6 3mlg-a3-m1-cA 161 80 0.8681 0.4907 0.9875 2.61e-49 3mlg-a3-m1-cA_3mlg-a3-m2-cB
7 4u12-a1-m2-cA 79 80 0.8571 0.9873 0.9750 1.70e-47 4u12-a1-m1-cA_4u12-a1-m2-cA
8 4u12-a1-m1-cA 79 80 0.8571 0.9873 0.9750 1.70e-47 4u12-a1-m1-cA_4u12-a1-m2-cA
9 3otg-a2-m2-cA 388 29 0.1319 0.0309 0.4138 1.0 3otg-a2-m1-cA_3otg-a2-m2-cA
10 3otg-a2-m1-cA 388 29 0.1319 0.0309 0.4138 1.0 3otg-a2-m1-cA_3otg-a2-m2-cA
11 4aln-a3-m1-cK 218 74 0.2198 0.0917 0.2703 4.7 4aln-a3-m1-cJ_4aln-a3-m1-cK
12 4aln-a3-m1-cI 214 74 0.2198 0.0935 0.2703 4.8 4aln-a3-m1-cL_4aln-a3-m1-cI
13 3bcg-a1-m1-cB 207 92 0.2637 0.1159 0.2609 8.7 3bcg-a1-m1-cA_3bcg-a1-m1-cB
14 3bcg-a1-m1-cA 207 92 0.2637 0.1159 0.2609 8.7 3bcg-a1-m1-cA_3bcg-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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