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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
EALGMIETKGLVGSIEAADAMVDAANVTLIGKEHVGGGLVTVLVRGDVGAVKAATDAGAA
AAQRVGELVSVHVIPRPHIEVETIL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7mmx-a2-m1-cD 86 85 1.0000 0.9884 1.0000 3.10e-53 7mmx-a2-m3-cF_7mmx-a2-m1-cD
2 7mmx-a2-m3-cF 85 85 1.0000 1.0000 1.0000 3.51e-53 7mmx-a2-m3-cF_7mmx-a2-m1-cD
3 4axj-a1-m1-cA 87 85 0.8588 0.8391 0.8588 2.75e-38 4axj-a1-m2-cC_4axj-a1-m1-cA
4 4axj-a1-m2-cC 86 85 0.8588 0.8488 0.8588 2.98e-38 4axj-a1-m2-cC_4axj-a1-m1-cA
5 5d6v-a1-m6-cA 90 85 0.7294 0.6889 0.7294 4.76e-31 5d6v-a1-m2-cA_5d6v-a1-m6-cA
6 5d6v-a1-m2-cA 90 85 0.7294 0.6889 0.7294 4.76e-31 5d6v-a1-m2-cA_5d6v-a1-m6-cA
7 3mpy-a1-m6-cA 96 85 0.7176 0.6354 0.7176 5.11e-30 3mpy-a1-m2-cA_3mpy-a1-m6-cA
8 3mpy-a1-m2-cA 96 85 0.7176 0.6354 0.7176 5.11e-30 3mpy-a1-m2-cA_3mpy-a1-m6-cA
9 7ckc-a1-m1-cCz 89 85 0.6588 0.6292 0.6588 3.47e-29 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
10 7ckc-a1-m1-cBi 89 85 0.6588 0.6292 0.6588 3.47e-29 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
11 2ewh-a1-m6-cA 92 85 0.6588 0.6087 0.6588 3.74e-29 2ewh-a1-m2-cA_2ewh-a1-m6-cA
12 2ewh-a1-m2-cA 92 85 0.6588 0.6087 0.6588 3.74e-29 2ewh-a1-m2-cA_2ewh-a1-m6-cA
13 3dnc-a1-m6-cA 90 86 0.5647 0.5333 0.5581 9.93e-26 3dnc-a1-m2-cA_3dnc-a1-m6-cA
14 3dnc-a1-m2-cA 90 86 0.5647 0.5333 0.5581 9.93e-26 3dnc-a1-m2-cA_3dnc-a1-m6-cA
15 3ssq-a1-m2-cC 100 86 0.5647 0.4800 0.5581 1.25e-25 3ssq-a1-m1-cC_3ssq-a1-m2-cC
16 3ssq-a1-m1-cC 100 86 0.5647 0.4800 0.5581 1.25e-25 3ssq-a1-m1-cC_3ssq-a1-m2-cC
17 7mgp-a1-m6-cA 93 85 0.6000 0.5484 0.6000 3.10e-24 7mgp-a1-m2-cA_7mgp-a1-m6-cA
18 7mgp-a1-m2-cA 93 85 0.6000 0.5484 0.6000 3.10e-24 7mgp-a1-m2-cA_7mgp-a1-m6-cA
19 6owg-a1-m1-cDA 100 86 0.5412 0.4600 0.5349 3.56e-24 6owg-a1-m1-cC8_6owg-a1-m1-cDA
20 6owg-a1-m1-cC8 100 86 0.5412 0.4600 0.5349 3.56e-24 6owg-a1-m1-cC8_6owg-a1-m1-cDA
21 6owf-a1-m1-cW 100 86 0.5412 0.4600 0.5349 3.56e-24 6owf-a1-m1-cA6_6owf-a1-m1-cW
22 6owf-a1-m1-cA6 100 86 0.5412 0.4600 0.5349 3.56e-24 6owf-a1-m1-cA6_6owf-a1-m1-cW
23 4ox6-a1-m3-cA 103 87 0.4353 0.3592 0.4253 1.10e-15 4ox6-a1-m3-cB_4ox6-a1-m3-cA
24 4ox6-a1-m3-cB 93 87 0.4353 0.3978 0.4253 1.18e-15 4ox6-a1-m3-cB_4ox6-a1-m3-cA
25 2a10-a1-m1-cE 102 86 0.4235 0.3529 0.4186 1.81e-12 2a10-a1-m1-cD_2a10-a1-m1-cE
26 2a10-a1-m1-cD 102 86 0.4235 0.3529 0.4186 1.81e-12 2a10-a1-m1-cD_2a10-a1-m1-cE
27 3pac-a1-m3-cA 183 81 0.3882 0.1803 0.4074 1.08e-08 3pac-a1-m2-cA_3pac-a1-m3-cA
28 3pac-a1-m3-cA 183 81 0.3294 0.1530 0.3457 1.66e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
29 3pac-a1-m2-cA 183 81 0.3882 0.1803 0.4074 1.08e-08 3pac-a1-m2-cA_3pac-a1-m3-cA
30 3pac-a1-m2-cA 183 81 0.3294 0.1530 0.3457 1.66e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
31 3nwg-a2-m3-cA 174 83 0.3647 0.1782 0.3735 7.20e-07 3nwg-a2-m2-cA_3nwg-a2-m3-cA
32 3nwg-a2-m3-cA 174 80 0.3647 0.1782 0.3875 2.96e-04 3nwg-a2-m2-cA_3nwg-a2-m3-cA
33 3nwg-a2-m2-cA 174 83 0.3647 0.1782 0.3735 7.20e-07 3nwg-a2-m2-cA_3nwg-a2-m3-cA
34 3nwg-a2-m2-cA 174 80 0.3647 0.1782 0.3875 2.96e-04 3nwg-a2-m2-cA_3nwg-a2-m3-cA
35 3nwg-a1-m6-cA 174 83 0.3647 0.1782 0.3735 7.20e-07 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
36 3nwg-a1-m6-cA 174 80 0.3647 0.1782 0.3875 2.96e-04 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
37 3nwg-a1-m3-cA 174 83 0.3647 0.1782 0.3735 7.20e-07 3nwg-a1-m3-cA_3nwg-a1-m6-cA
38 3nwg-a1-m3-cA 174 80 0.3647 0.1782 0.3875 2.96e-04 3nwg-a1-m3-cA_3nwg-a1-m6-cA
39 3nwg-a1-m1-cA 174 83 0.3647 0.1782 0.3735 7.20e-07 3nwg-a1-m1-cA_3nwg-a1-m6-cA
40 3nwg-a1-m1-cA 174 80 0.3647 0.1782 0.3875 2.96e-04 3nwg-a1-m1-cA_3nwg-a1-m6-cA
41 4axi-a1-m3-cA 116 54 0.2118 0.1552 0.3333 3.3 4axi-a1-m3-cB_4axi-a1-m3-cA
42 4axi-a1-m2-cA 116 54 0.2118 0.1552 0.3333 3.3 4axi-a1-m3-cB_4axi-a1-m2-cA
43 4axi-a1-m3-cB 115 54 0.2118 0.1565 0.3333 3.6 4axi-a1-m3-cB_4axi-a1-m2-cA, 4axi-a1-m3-cB_4axi-a1-m3-cA
44 1wpw-a2-m3-cB 336 49 0.1882 0.0476 0.3265 5.3 1wpw-a2-m1-cA_1wpw-a2-m3-cB, 1wpw-a2-m1-cB_1wpw-a2-m3-cB, 1wpw-a2-m3-cA_1wpw-a2-m3-cB
45 1wpw-a2-m3-cA 336 49 0.1882 0.0476 0.3265 5.3 1wpw-a2-m3-cA_1wpw-a2-m3-cB
46 1wpw-a2-m1-cB 336 49 0.1882 0.0476 0.3265 5.3 1wpw-a2-m1-cB_1wpw-a2-m3-cB
47 1wpw-a2-m1-cA 336 49 0.1882 0.0476 0.3265 5.3 1wpw-a2-m1-cA_1wpw-a2-m3-cB
48 1wpw-a1-m2-cB 336 49 0.1882 0.0476 0.3265 5.3 1wpw-a1-m1-cA_1wpw-a1-m2-cB, 1wpw-a1-m1-cB_1wpw-a1-m2-cB
49 1wpw-a1-m1-cB 336 49 0.1882 0.0476 0.3265 5.3 1wpw-a1-m1-cB_1wpw-a1-m2-cB
50 1wpw-a1-m1-cA 336 49 0.1882 0.0476 0.3265 5.3 1wpw-a1-m1-cA_1wpw-a1-m2-cB
51 8bbp-a1-m1-cA 344 27 0.1412 0.0349 0.4444 5.8 8bbp-a1-m1-cA_8bbp-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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