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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
EALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAA
AAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3mpy-a1-m6-cA 96 96 1.0000 1.0000 1.0000 5.95e-64 3mpy-a1-m2-cA_3mpy-a1-m6-cA
2 3mpy-a1-m2-cA 96 96 1.0000 1.0000 1.0000 5.95e-64 3mpy-a1-m2-cA_3mpy-a1-m6-cA
3 4axj-a1-m2-cC 86 86 0.6458 0.7209 0.7209 4.94e-32 4axj-a1-m2-cC_4axj-a1-m1-cA
4 4axj-a1-m1-cA 87 86 0.6458 0.7126 0.7209 5.67e-32 4axj-a1-m2-cC_4axj-a1-m1-cA
5 7mmx-a2-m1-cD 86 85 0.6354 0.7093 0.7176 4.04e-30 7mmx-a2-m3-cF_7mmx-a2-m1-cD
6 7mmx-a2-m3-cF 85 85 0.6354 0.7176 0.7176 4.48e-30 7mmx-a2-m3-cF_7mmx-a2-m1-cD
7 3dnc-a1-m6-cA 90 88 0.5208 0.5556 0.5682 4.61e-29 3dnc-a1-m2-cA_3dnc-a1-m6-cA
8 3dnc-a1-m2-cA 90 88 0.5208 0.5556 0.5682 4.61e-29 3dnc-a1-m2-cA_3dnc-a1-m6-cA
9 3ssq-a1-m2-cC 100 88 0.5208 0.5000 0.5682 1.14e-28 3ssq-a1-m1-cC_3ssq-a1-m2-cC
10 3ssq-a1-m1-cC 100 88 0.5208 0.5000 0.5682 1.14e-28 3ssq-a1-m1-cC_3ssq-a1-m2-cC
11 5d6v-a1-m6-cA 90 86 0.5625 0.6000 0.6279 4.84e-27 5d6v-a1-m2-cA_5d6v-a1-m6-cA
12 5d6v-a1-m2-cA 90 86 0.5625 0.6000 0.6279 4.84e-27 5d6v-a1-m2-cA_5d6v-a1-m6-cA
13 6owg-a1-m1-cDA 100 88 0.4896 0.4700 0.5341 5.20e-27 6owg-a1-m1-cC8_6owg-a1-m1-cDA
14 6owg-a1-m1-cC8 100 88 0.4896 0.4700 0.5341 5.20e-27 6owg-a1-m1-cC8_6owg-a1-m1-cDA
15 6owf-a1-m1-cW 100 88 0.4896 0.4700 0.5341 5.20e-27 6owf-a1-m1-cA6_6owf-a1-m1-cW
16 6owf-a1-m1-cA6 100 88 0.4896 0.4700 0.5341 5.20e-27 6owf-a1-m1-cA6_6owf-a1-m1-cW
17 7ckc-a1-m1-cCz 89 86 0.5000 0.5393 0.5581 1.54e-25 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
18 7ckc-a1-m1-cBi 89 86 0.5000 0.5393 0.5581 1.54e-25 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
19 2ewh-a1-m6-cA 92 86 0.5000 0.5217 0.5581 2.09e-25 2ewh-a1-m2-cA_2ewh-a1-m6-cA
20 2ewh-a1-m2-cA 92 86 0.5000 0.5217 0.5581 2.09e-25 2ewh-a1-m2-cA_2ewh-a1-m6-cA
21 7mgp-a1-m6-cA 93 84 0.4792 0.4946 0.5476 1.42e-22 7mgp-a1-m2-cA_7mgp-a1-m6-cA
22 7mgp-a1-m2-cA 93 84 0.4792 0.4946 0.5476 1.42e-22 7mgp-a1-m2-cA_7mgp-a1-m6-cA
23 4ox6-a1-m3-cB 93 91 0.4062 0.4194 0.4286 8.82e-20 4ox6-a1-m3-cB_4ox6-a1-m3-cA
24 4ox6-a1-m3-cA 103 91 0.4062 0.3786 0.4286 9.85e-20 4ox6-a1-m3-cB_4ox6-a1-m3-cA
25 2a10-a1-m1-cE 102 90 0.3750 0.3529 0.4000 9.87e-14 2a10-a1-m1-cD_2a10-a1-m1-cE
26 2a10-a1-m1-cD 102 90 0.3750 0.3529 0.4000 9.87e-14 2a10-a1-m1-cD_2a10-a1-m1-cE
27 3pac-a1-m3-cA 183 80 0.3438 0.1803 0.4125 2.02e-08 3pac-a1-m2-cA_3pac-a1-m3-cA
28 3pac-a1-m3-cA 183 81 0.2917 0.1530 0.3457 1.63e-04 3pac-a1-m2-cA_3pac-a1-m3-cA
29 3pac-a1-m2-cA 183 80 0.3438 0.1803 0.4125 2.02e-08 3pac-a1-m2-cA_3pac-a1-m3-cA
30 3pac-a1-m2-cA 183 81 0.2917 0.1530 0.3457 1.63e-04 3pac-a1-m2-cA_3pac-a1-m3-cA
31 3nwg-a2-m3-cA 174 83 0.3438 0.1897 0.3976 1.39e-07 3nwg-a2-m2-cA_3nwg-a2-m3-cA
32 3nwg-a2-m3-cA 174 78 0.2708 0.1494 0.3333 3.61e-05 3nwg-a2-m2-cA_3nwg-a2-m3-cA
33 3nwg-a2-m2-cA 174 83 0.3438 0.1897 0.3976 1.39e-07 3nwg-a2-m2-cA_3nwg-a2-m3-cA
34 3nwg-a2-m2-cA 174 78 0.2708 0.1494 0.3333 3.61e-05 3nwg-a2-m2-cA_3nwg-a2-m3-cA
35 3nwg-a1-m6-cA 174 83 0.3438 0.1897 0.3976 1.39e-07 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
36 3nwg-a1-m6-cA 174 78 0.2708 0.1494 0.3333 3.61e-05 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
37 3nwg-a1-m3-cA 174 83 0.3438 0.1897 0.3976 1.39e-07 3nwg-a1-m3-cA_3nwg-a1-m6-cA
38 3nwg-a1-m3-cA 174 78 0.2708 0.1494 0.3333 3.61e-05 3nwg-a1-m3-cA_3nwg-a1-m6-cA
39 3nwg-a1-m1-cA 174 83 0.3438 0.1897 0.3976 1.39e-07 3nwg-a1-m1-cA_3nwg-a1-m6-cA
40 3nwg-a1-m1-cA 174 78 0.2708 0.1494 0.3333 3.61e-05 3nwg-a1-m1-cA_3nwg-a1-m6-cA
41 3u27-a2-m1-cF 215 76 0.2917 0.1302 0.3684 0.14 3u27-a2-m1-cD_3u27-a2-m1-cF
42 3u27-a2-m1-cD 215 76 0.2917 0.1302 0.3684 0.14 3u27-a2-m1-cD_3u27-a2-m1-cF
43 3bni-a1-m1-cB 171 35 0.1354 0.0760 0.3714 0.67 3bni-a1-m1-cB_3bni-a1-m1-cA
44 3g0t-a1-m1-cB 419 32 0.1458 0.0334 0.4375 0.80 3g0t-a1-m1-cB_3g0t-a1-m1-cA
45 3g0t-a1-m1-cA 420 32 0.1458 0.0333 0.4375 0.80 3g0t-a1-m1-cB_3g0t-a1-m1-cA
46 3fan-a2-m2-cA 192 42 0.1667 0.0833 0.3810 1.00 3fan-a2-m1-cA_3fan-a2-m2-cA
47 3fan-a2-m1-cA 192 42 0.1667 0.0833 0.3810 1.00 3fan-a2-m1-cA_3fan-a2-m2-cA
48 4q9v-a1-m1-cB 186 21 0.1042 0.0538 0.4762 1.1 4q9v-a1-m1-cA_4q9v-a1-m1-cB
49 4q9v-a1-m1-cA 183 21 0.1042 0.0546 0.4762 1.1 4q9v-a1-m1-cA_4q9v-a1-m1-cB
50 2eo4-a1-m2-cA 149 82 0.2604 0.1678 0.3049 2.2 2eo4-a1-m1-cA_2eo4-a1-m2-cA
51 2eo4-a1-m1-cA 149 82 0.2604 0.1678 0.3049 2.2 2eo4-a1-m1-cA_2eo4-a1-m2-cA
52 2qya-a2-m1-cD 115 32 0.1354 0.1130 0.4062 3.8 2qya-a2-m1-cC_2qya-a2-m1-cD
53 2qya-a2-m1-cC 115 32 0.1354 0.1130 0.4062 3.8 2qya-a2-m1-cC_2qya-a2-m1-cD
54 3mpv-a2-m3-cB 200 39 0.1562 0.0750 0.3846 3.9 3mpv-a2-m2-cB_3mpv-a2-m3-cB
55 3mpv-a2-m2-cB 200 39 0.1562 0.0750 0.3846 3.9 3mpv-a2-m2-cB_3mpv-a2-m3-cB
56 3bni-a1-m1-cA 174 29 0.1146 0.0632 0.3793 4.0 3bni-a1-m1-cB_3bni-a1-m1-cA
57 4u6i-a1-m1-cA 217 24 0.1250 0.0553 0.5000 9.0 4u6i-a1-m1-cC_4u6i-a1-m1-cA
58 4u6i-a1-m1-cC 216 24 0.1250 0.0556 0.5000 9.3 4u6i-a1-m1-cC_4u6i-a1-m1-cA
59 4cvb-a2-m2-cA 562 70 0.2083 0.0356 0.2857 9.8 4cvb-a2-m1-cA_4cvb-a2-m2-cA
60 4cvb-a2-m1-cA 562 70 0.2083 0.0356 0.2857 9.8 4cvb-a2-m1-cA_4cvb-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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