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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=43)
EALKILNNIRTLRAQARECTLETLEELEKLEVVVNERREEESA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4icg-a1-m1-cB 43 43 1.0000 1.0000 1.0000 4.95e-22 4icg-a1-m1-cA_4icg-a1-m1-cB
2 4icg-a1-m1-cA 43 43 1.0000 1.0000 1.0000 4.95e-22 4icg-a1-m1-cA_4icg-a1-m1-cB
3 3nr7-a1-m2-cB 81 36 0.7907 0.4198 0.9444 4.92e-14 3nr7-a1-m1-cA_3nr7-a1-m2-cB
4 3nr7-a1-m1-cA 81 36 0.7907 0.4198 0.9444 4.92e-14 3nr7-a1-m1-cA_3nr7-a1-m2-cB
5 1lr1-a1-m1-cB 57 36 0.7907 0.5965 0.9444 5.82e-14 1lr1-a1-m1-cA_1lr1-a1-m1-cB
6 1lr1-a1-m1-cA 57 36 0.7907 0.5965 0.9444 5.82e-14 1lr1-a1-m1-cA_1lr1-a1-m1-cB
7 1ov9-a1-m1-cA 45 43 0.6047 0.5778 0.6047 4.69e-07 1ov9-a1-m1-cA_1ov9-a1-m1-cB
8 1ov9-a1-m1-cB 48 39 0.5581 0.5000 0.6154 4.62e-06 1ov9-a1-m1-cA_1ov9-a1-m1-cB
9 3oic-a1-m2-cA 247 27 0.3023 0.0526 0.4815 5.9 3oic-a1-m2-cA_3oic-a1-m2-cD
10 3oic-a1-m2-cD 252 27 0.3023 0.0516 0.4815 6.0 3oic-a1-m2-cA_3oic-a1-m2-cD
11 3oid-a1-m1-cA 249 27 0.3023 0.0522 0.4815 6.1 3oid-a1-m1-cD_3oid-a1-m1-cA
12 3oid-a1-m1-cD 248 27 0.3023 0.0524 0.4815 6.2 3oid-a1-m1-cC_3oid-a1-m1-cD, 3oid-a1-m1-cD_3oid-a1-m1-cA, 3oid-a1-m1-cD_3oid-a1-m1-cB
13 3oid-a1-m1-cC 248 27 0.3023 0.0524 0.4815 6.2 3oid-a1-m1-cC_3oid-a1-m1-cD
14 3oid-a1-m1-cB 251 27 0.3023 0.0518 0.4815 6.3 3oid-a1-m1-cD_3oid-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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