Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=10)
EAPPCYMDVI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5dzd-a1-m1-cC 12 10 1.0000 0.8333 1.0000 0.17 5dzd-a1-m1-cD_5dzd-a1-m1-cC
2 5cq2-a1-m4-cC 12 10 1.0000 0.8333 1.0000 0.17 5cq2-a1-m3-cB_5cq2-a1-m4-cC
3 5cq2-a1-m3-cB 12 10 1.0000 0.8333 1.0000 0.17 5cq2-a1-m3-cB_5cq2-a1-m4-cC
4 5dzd-a1-m1-cD 10 10 1.0000 1.0000 1.0000 0.17 5dzd-a1-m1-cD_5dzd-a1-m1-cC
5 5dws-a1-m1-cF 10 10 1.0000 1.0000 1.0000 0.17 5dws-a1-m1-cF_5dws-a1-m1-cH
6 5dws-a1-m1-cD 10 10 1.0000 1.0000 1.0000 0.17 5dws-a1-m1-cB_5dws-a1-m1-cD
7 5dws-a1-m1-cB 10 10 1.0000 1.0000 1.0000 0.17 5dws-a1-m1-cB_5dws-a1-m1-cD
8 5dws-a1-m1-cH 11 10 1.0000 0.9091 1.0000 0.20 5dws-a1-m1-cF_5dws-a1-m1-cH

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600