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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
EDALVTREDGSFLIDGTLPIEELREVLGANNYHTLAGCISYFGRIPHVGEYFDWAGWRIE
IVDLDGARIDLLLQRLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2oai-a1-m2-cA 77 77 1.0000 1.0000 1.0000 3.76e-52 2oai-a1-m1-cA_2oai-a1-m2-cA
2 2oai-a1-m1-cA 77 77 1.0000 1.0000 1.0000 3.76e-52 2oai-a1-m1-cA_2oai-a1-m2-cA
3 2pls-a6-m2-cL 83 77 0.4286 0.3976 0.4286 2.60e-13 2pls-a6-m1-cL_2pls-a6-m2-cL
4 2pls-a6-m1-cL 83 77 0.4286 0.3976 0.4286 2.60e-13 2pls-a6-m1-cL_2pls-a6-m2-cL
5 2pls-a1-m1-cC 83 77 0.4286 0.3976 0.4286 2.60e-13 2pls-a1-m1-cB_2pls-a1-m1-cC
6 2pls-a1-m1-cB 83 77 0.4286 0.3976 0.4286 2.60e-13 2pls-a1-m1-cB_2pls-a1-m1-cC
7 3ded-a2-m1-cC 88 85 0.4545 0.3977 0.4118 3.49e-13 3ded-a2-m1-cD_3ded-a2-m1-cC
8 3ded-a2-m1-cD 83 84 0.4416 0.4096 0.4048 1.25e-12 3ded-a2-m1-cD_3ded-a2-m1-cC
9 2p4p-a1-m1-cA 72 73 0.3117 0.3333 0.3288 0.003 2p4p-a1-m1-cB_2p4p-a1-m1-cA
10 2p4p-a1-m1-cB 66 69 0.2987 0.3485 0.3333 0.019 2p4p-a1-m1-cB_2p4p-a1-m1-cA
11 6uss-a1-m1-cB 485 48 0.2078 0.0330 0.3333 0.54 6uss-a1-m1-cA_6uss-a1-m1-cB
12 6uss-a1-m1-cA 485 48 0.2078 0.0330 0.3333 0.54 6uss-a1-m1-cA_6uss-a1-m1-cB
13 3n85-a1-m3-cA 605 38 0.1948 0.0248 0.3947 0.97 3n85-a1-m2-cA_3n85-a1-m3-cA
14 3n85-a1-m2-cA 605 38 0.1948 0.0248 0.3947 0.97 3n85-a1-m2-cA_3n85-a1-m3-cA
15 1ud5-a2-m3-cA 480 42 0.1948 0.0312 0.3571 1.1 1ud5-a2-m2-cA_1ud5-a2-m3-cA
16 1ud5-a2-m2-cA 480 42 0.1948 0.0312 0.3571 1.1 1ud5-a2-m2-cA_1ud5-a2-m3-cA
17 2it2-a1-m1-cB 190 40 0.1558 0.0632 0.3000 1.2 2it2-a1-m1-cA_2it2-a1-m1-cB
18 6yq9-a3-m1-cBBB 476 21 0.1169 0.0189 0.4286 4.2 6yq9-a3-m1-cAAA_6yq9-a3-m1-cBBB
19 6yq9-a3-m1-cAAA 476 21 0.1169 0.0189 0.4286 4.2 6yq9-a3-m1-cAAA_6yq9-a3-m1-cBBB
20 6eev-a1-m2-cA 374 32 0.1688 0.0348 0.4062 5.1 6eev-a1-m1-cA_6eev-a1-m2-cA
21 6eev-a1-m1-cA 374 32 0.1688 0.0348 0.4062 5.1 6eev-a1-m1-cA_6eev-a1-m2-cA
22 6dio-a3-m5-cB 427 32 0.1688 0.0304 0.4062 5.5 6dio-a3-m5-cB_6dio-a3-m2-cC
23 6dio-a3-m2-cC 428 32 0.1688 0.0304 0.4062 5.6 6dio-a3-m5-cB_6dio-a3-m2-cC
24 3ruy-a1-m1-cB 391 21 0.1558 0.0307 0.5714 7.5 3ruy-a1-m1-cA_3ruy-a1-m1-cB
25 3ruy-a1-m1-cA 391 21 0.1558 0.0307 0.5714 7.5 3ruy-a1-m1-cA_3ruy-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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