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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
EDEGALAKSPLQLTTDDVYDISYVVGRELMALGSDPRVTRLQFKIVRVMEMLETLVNEGS
LAVEELRMERDNLKQEVEGLR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4kp3-a1-m1-cD 82 81 1.0000 0.9878 1.0000 2.30e-53 4kp3-a1-m1-cC_4kp3-a1-m1-cD
2 4kp3-a1-m1-cC 81 81 1.0000 1.0000 1.0000 2.94e-53 4kp3-a1-m1-cC_4kp3-a1-m1-cD
3 5gxx-a1-m1-cB 599 39 0.1605 0.0217 0.3333 1.5 5gxx-a1-m1-cB_5gxx-a1-m1-cA
4 5gxx-a1-m1-cA 600 39 0.1605 0.0217 0.3333 1.5 5gxx-a1-m1-cB_5gxx-a1-m1-cA
5 4kxf-a11-m5-cN 881 71 0.2593 0.0238 0.2958 6.1 4kxf-a11-m5-cN_4kxf-a11-m1-cD, 4kxf-a11-m5-cN_4kxf-a11-m5-cD
6 4kxf-a11-m5-cD 899 71 0.2593 0.0234 0.2958 6.1 4kxf-a11-m1-cD_4kxf-a11-m5-cD, 4kxf-a11-m5-cN_4kxf-a11-m5-cD
7 4kxf-a11-m1-cD 899 71 0.2593 0.0234 0.2958 6.1 4kxf-a11-m1-cD_4kxf-a11-m5-cD, 4kxf-a11-m5-cN_4kxf-a11-m1-cD
8 3jbl-a1-m1-cK 908 71 0.2593 0.0231 0.2958 6.1 3jbl-a1-m1-cJ_3jbl-a1-m1-cK
9 3jbl-a1-m1-cJ 908 71 0.2593 0.0231 0.2958 6.1 3jbl-a1-m1-cJ_3jbl-a1-m1-cK

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Reference:
Jacob Schwartz et al.

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