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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
EDKLALGREIFLERSEPQCALCHTLADAEAVGEVGPNLDELKPDAERVNTAVTNGIGPMP
ANEILTDEEIEAVALYVSTVAGKAKN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4pwa-a2-m3-cB 86 86 1.0000 1.0000 1.0000 3.43e-58 4pwa-a2-m3-cB_4pwa-a2-m3-cD
2 4pwa-a2-m3-cD 87 86 1.0000 0.9885 1.0000 3.78e-58 4pwa-a2-m3-cB_4pwa-a2-m3-cD
3 2v08-a1-m3-cB 84 85 0.3605 0.3690 0.3647 0.002 2v08-a1-m1-cA_2v08-a1-m3-cB, 2v08-a1-m2-cB_2v08-a1-m3-cB, 2v08-a1-m3-cA_2v08-a1-m3-cB
4 2v08-a1-m3-cA 84 85 0.3605 0.3690 0.3647 0.002 2v08-a1-m3-cA_2v08-a1-m3-cB
5 2v08-a1-m2-cB 84 85 0.3605 0.3690 0.3647 0.002 2v08-a1-m2-cB_2v08-a1-m3-cB
6 2v08-a1-m1-cA 84 85 0.3605 0.3690 0.3647 0.002 2v08-a1-m1-cA_2v08-a1-m3-cB
7 6hk5-a2-m1-cC 61 57 0.1860 0.2623 0.2807 1.1 6hk5-a2-m1-cC_6hk5-a2-m1-cB
8 6hk5-a4-m1-cF 59 57 0.1860 0.2712 0.2807 1.1 6hk5-a4-m1-cF_6hk5-a4-m1-cD
9 5g23-a1-m1-cB 194 55 0.1860 0.0825 0.2909 1.2 5g23-a1-m1-cA_5g23-a1-m1-cB
10 6hk5-a2-m1-cB 64 57 0.1860 0.2500 0.2807 1.9 6hk5-a2-m1-cC_6hk5-a2-m1-cB
11 6hk5-a4-m1-cD 62 57 0.1860 0.2581 0.2807 2.0 6hk5-a4-m1-cF_6hk5-a4-m1-cD
12 5g23-a1-m1-cA 191 62 0.1977 0.0890 0.2742 2.5 5g23-a1-m1-cA_5g23-a1-m1-cB
13 1bg9-a1-m2-cA 403 51 0.1860 0.0397 0.3137 3.1 1bg9-a1-m1-cA_1bg9-a1-m2-cA
14 1bg9-a1-m1-cA 403 51 0.1860 0.0397 0.3137 3.1 1bg9-a1-m1-cA_1bg9-a1-m2-cA
15 4e3r-a3-m1-cB 451 42 0.2093 0.0399 0.4286 4.0 4e3r-a3-m1-cA_4e3r-a3-m1-cB
16 4e3r-a3-m1-cA 451 42 0.2093 0.0399 0.4286 4.0 4e3r-a3-m1-cA_4e3r-a3-m1-cB
17 3fch-a2-m1-cA 205 50 0.1860 0.0780 0.3200 7.6 3fch-a2-m5-cB_3fch-a2-m1-cA
18 3fch-a4-m8-cB 203 50 0.1860 0.0788 0.3200 7.9 3fch-a4-m7-cB_3fch-a4-m8-cB
19 3fch-a4-m7-cB 203 50 0.1860 0.0788 0.3200 7.9 3fch-a4-m7-cB_3fch-a4-m8-cB
20 3fch-a2-m5-cB 203 50 0.1860 0.0788 0.3200 7.9 3fch-a2-m5-cB_3fch-a2-m1-cA
21 1yxo-a1-m1-cB 322 58 0.1744 0.0466 0.2586 8.0 1yxo-a1-m1-cA_1yxo-a1-m1-cB
22 1yxo-a1-m1-cA 322 58 0.1744 0.0466 0.2586 8.0 1yxo-a1-m1-cA_1yxo-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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