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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
EDPNAKVIRELREEVEKLREQLSQAEAMKAELKEKLEESEKLIKELTVTWEEKLRKTEAI
AQERQRQLESMGISLETSGIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5djn-a1-m1-cC 81 81 1.0000 1.0000 1.0000 2.79e-49 5djn-a1-m1-cA_5djn-a1-m1-cC
2 5djn-a1-m1-cA 77 77 0.9506 1.0000 1.0000 2.74e-46 5djn-a1-m1-cA_5djn-a1-m1-cC
3 5djo-a1-m1-cB 160 56 0.6790 0.3438 0.9821 1.88e-28 5djo-a1-m1-cA_5djo-a1-m1-cB
4 5djo-a1-m1-cA 158 55 0.6667 0.3418 0.9818 1.00e-27 5djo-a1-m1-cA_5djo-a1-m1-cB
5 4egx-a2-m1-cD 173 46 0.3086 0.1445 0.5435 6.13e-09 4egx-a2-m1-cD_4egx-a2-m1-cC
6 4egx-a2-m1-cC 174 46 0.3086 0.1437 0.5435 6.89e-09 4egx-a2-m1-cD_4egx-a2-m1-cC
7 7d8v-a1-m2-cA 365 24 0.2346 0.0521 0.7917 7.53e-07 7d8v-a1-m1-cA_7d8v-a1-m2-cA
8 7d8v-a1-m1-cA 365 24 0.2346 0.0521 0.7917 7.53e-07 7d8v-a1-m1-cA_7d8v-a1-m2-cA
9 5jvm-a1-m1-cA 82 65 0.2716 0.2683 0.3385 0.13 5jvm-a1-m1-cB_5jvm-a1-m1-cA
10 5jvm-a1-m1-cB 79 65 0.2716 0.2785 0.3385 0.13 5jvm-a1-m1-cB_5jvm-a1-m1-cA
11 3kdk-a1-m1-cB 184 62 0.2593 0.1141 0.3387 0.13 3kdk-a1-m1-cB_3kdk-a1-m1-cA
12 3kdk-a1-m1-cA 186 62 0.2593 0.1129 0.3387 0.14 3kdk-a1-m1-cB_3kdk-a1-m1-cA
13 7z8f-a1-m1-cf 4579 83 0.2840 0.0050 0.2771 0.34 7z8f-a1-m1-ce_7z8f-a1-m1-cf, 7z8f-a1-m1-cm_7z8f-a1-m1-cf
14 7z8f-a1-m1-ce 4579 83 0.2840 0.0050 0.2771 0.34 7z8f-a1-m1-ce_7z8f-a1-m1-cf
15 7z8f-a1-m1-cn 4566 83 0.2840 0.0050 0.2771 0.34 7z8f-a1-m1-cm_7z8f-a1-m1-cn
16 7z8f-a1-m1-cm 4562 83 0.2840 0.0050 0.2771 0.34 7z8f-a1-m1-cm_7z8f-a1-m1-cf, 7z8f-a1-m1-cm_7z8f-a1-m1-cn
17 5hyt-a2-m1-cG 29 24 0.1481 0.4138 0.5000 3.1 5hyt-a2-m1-cE_5hyt-a2-m1-cG
18 5hyt-a2-m1-cE 28 24 0.1481 0.4286 0.5000 3.4 5hyt-a2-m1-cE_5hyt-a2-m1-cG
19 2c6x-a2-m1-cD 363 48 0.2099 0.0468 0.3542 4.3 2c6x-a2-m1-cC_2c6x-a2-m1-cD
20 2c6x-a2-m1-cC 363 48 0.2099 0.0468 0.3542 4.3 2c6x-a2-m1-cC_2c6x-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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