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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
EDTLTMLVNATSRQNAAIEALENRLSTLESSLKPIQDMGKVISSLNRSCAEMVAKYDLLE
HHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gbq-a1-m1-cD 68 63 1.0000 0.9265 1.0000 1.41e-41 6gbq-a1-m1-cD_6gbq-a1-m1-cA
2 6gbr-a1-m1-cA 67 63 1.0000 0.9403 1.0000 1.62e-41 6gbr-a1-m1-cB_6gbr-a1-m1-cA
3 6gbq-a2-m1-cH 63 63 1.0000 1.0000 1.0000 1.81e-41 6gbq-a2-m1-cH_6gbq-a2-m1-cF
4 6gbq-a1-m1-cA 70 63 1.0000 0.9000 1.0000 2.27e-41 6gbq-a1-m1-cD_6gbq-a1-m1-cA
5 6gbq-a1-m1-cC 69 63 1.0000 0.9130 1.0000 2.30e-41 6gbq-a1-m1-cB_6gbq-a1-m1-cC
6 6gbq-a2-m1-cF 67 63 1.0000 0.9403 1.0000 2.63e-41 6gbq-a2-m1-cH_6gbq-a2-m1-cF
7 6gbr-a1-m1-cB 66 62 0.9841 0.9394 1.0000 1.43e-40 6gbr-a1-m1-cB_6gbr-a1-m1-cA
8 6gbq-a1-m1-cB 65 61 0.9683 0.9385 1.0000 1.57e-39 6gbq-a1-m1-cB_6gbq-a1-m1-cC
9 5vgc-a2-m2-cA 211 47 0.2698 0.0806 0.3617 0.83 5vgc-a2-m1-cA_5vgc-a2-m2-cA, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
10 5vgc-a2-m1-cA 211 47 0.2698 0.0806 0.3617 0.83 5vgc-a2-m1-cA_5vgc-a2-m2-cA
11 5vgc-a2-m2-cB 204 47 0.2698 0.0833 0.3617 0.84 5vgc-a2-m1-cB_5vgc-a2-m2-cB, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
12 5vgc-a2-m1-cB 204 47 0.2698 0.0833 0.3617 0.84 5vgc-a2-m1-cB_5vgc-a2-m2-cB
13 4z6k-a1-m1-cC 345 33 0.1429 0.0261 0.2727 9.1 4z6k-a1-m1-cD_4z6k-a1-m1-cC
14 4z6k-a1-m1-cA 345 33 0.1429 0.0261 0.2727 9.1 4z6k-a1-m1-cD_4z6k-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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