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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=40)
EDYERRRSECVSEMLDLEKQFSELKEKLFRERLSQLRLRL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2xus-a1-m3-cB 40 40 1.0000 1.0000 1.0000 1.92e-20 2xus-a1-m2-cB_2xus-a1-m3-cB
2 2xus-a1-m2-cB 40 40 1.0000 1.0000 1.0000 1.92e-20 2xus-a1-m2-cB_2xus-a1-m3-cB
3 4auv-a3-m3-cC 35 34 0.8500 0.9714 1.0000 9.37e-17 4auv-a3-m3-cH_4auv-a3-m3-cC
4 4auv-a2-m3-cC 35 34 0.8500 0.9714 1.0000 9.37e-17 4auv-a2-m5-cG_4auv-a2-m3-cC
5 4auv-a1-m1-cA 35 34 0.8500 0.9714 1.0000 9.37e-17 4auv-a1-m2-cB_4auv-a1-m1-cA
6 4auv-a2-m5-cG 27 27 0.6750 1.0000 1.0000 1.20e-11 4auv-a2-m1-cH_4auv-a2-m5-cG, 4auv-a2-m5-cG_4auv-a2-m3-cC
7 4auv-a1-m2-cB 27 27 0.6750 1.0000 1.0000 1.20e-11 4auv-a1-m2-cB_4auv-a1-m1-cA
8 4auv-a3-m3-cH 22 22 0.5500 1.0000 1.0000 1.79e-08 4auv-a3-m3-cH_4auv-a3-m3-cC
9 4auv-a2-m1-cH 22 22 0.5500 1.0000 1.0000 1.79e-08 4auv-a2-m1-cH_4auv-a2-m5-cG
10 4auv-a1-m2-cE 21 21 0.5250 1.0000 1.0000 1.08e-07 4auv-a1-m2-cD_4auv-a1-m2-cE
11 4auv-a1-m2-cD 18 18 0.4500 1.0000 1.0000 8.65e-06 4auv-a1-m2-cD_4auv-a1-m2-cE
12 3jbh-a1-m8-cG 962 44 0.4500 0.0187 0.4091 0.82 3jbh-a1-m8-cG_3jbh-a1-m8-cH
13 3jbh-a1-m8-cH 964 44 0.4500 0.0187 0.4091 0.83 3jbh-a1-m8-cG_3jbh-a1-m8-cH
14 8co6-a1-m5-cB 744 28 0.2500 0.0134 0.3571 2.5 8co6-a1-m5-cA_8co6-a1-m5-cB
15 1ddz-a1-m1-cB 481 22 0.2750 0.0229 0.5000 8.4 1ddz-a1-m1-cA_1ddz-a1-m1-cB
16 1ddz-a1-m1-cA 481 22 0.2750 0.0229 0.5000 8.4 1ddz-a1-m1-cA_1ddz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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