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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
EECVFPFVYRNRKHFDCTVHGSLFPWCSLDADYVGRWKYCAQRDYAKCVFPFIYGGKKYE
TCTKIGSMWMSWCSLSPNYDKDRAWKYC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1h8p-a1-m2-cB 88 88 1.0000 1.0000 1.0000 3.68e-63 1h8p-a1-m1-cA_1h8p-a1-m2-cB, 1h8p-a1-m2-cA_1h8p-a1-m2-cB
2 1h8p-a1-m2-cA 88 88 1.0000 1.0000 1.0000 3.68e-63 1h8p-a1-m2-cA_1h8p-a1-m2-cB
3 1h8p-a1-m1-cA 88 88 1.0000 1.0000 1.0000 3.68e-63 1h8p-a1-m1-cA_1h8p-a1-m2-cB
4 1eak-a2-m1-cD 419 102 0.4091 0.0859 0.3529 1.67e-12 1eak-a2-m1-cB_1eak-a2-m1-cD
5 1eak-a2-m1-cD 419 102 0.3295 0.0692 0.2843 6.93e-08 1eak-a2-m1-cB_1eak-a2-m1-cD
6 1eak-a2-m1-cD 419 62 0.2727 0.0573 0.3871 7.27e-06 1eak-a2-m1-cB_1eak-a2-m1-cD
7 1eak-a2-m1-cB 419 102 0.4091 0.0859 0.3529 1.67e-12 1eak-a2-m1-cB_1eak-a2-m1-cD
8 1eak-a2-m1-cB 419 102 0.3295 0.0692 0.2843 6.93e-08 1eak-a2-m1-cB_1eak-a2-m1-cD
9 1eak-a2-m1-cB 419 62 0.2727 0.0573 0.3871 7.27e-06 1eak-a2-m1-cB_1eak-a2-m1-cD
10 3m7p-a1-m2-cA 301 104 0.3864 0.1130 0.3269 1.00e-10 3m7p-a1-m1-cA_3m7p-a1-m2-cA
11 3m7p-a1-m1-cA 301 104 0.3864 0.1130 0.3269 1.00e-10 3m7p-a1-m1-cA_3m7p-a1-m2-cA
12 7prk-a1-m2-cA 54 42 0.2045 0.3333 0.4286 5.03e-06 7prk-a1-m1-cA_7prk-a1-m2-cA
13 7prk-a1-m2-cA 54 46 0.1932 0.3148 0.3696 0.23 7prk-a1-m1-cA_7prk-a1-m2-cA
14 7prk-a1-m1-cA 54 42 0.2045 0.3333 0.4286 5.03e-06 7prk-a1-m1-cA_7prk-a1-m2-cA
15 7prk-a1-m1-cA 54 46 0.1932 0.3148 0.3696 0.23 7prk-a1-m1-cA_7prk-a1-m2-cA
16 7jpu-a1-m1-cD 1155 41 0.1591 0.0121 0.3415 0.077 7jpu-a1-m1-cD_7jpu-a1-m1-cA, 7jpu-a1-m1-cD_7jpu-a1-m1-cC
17 7jpu-a1-m1-cD 1155 72 0.2045 0.0156 0.2500 4.1 7jpu-a1-m1-cD_7jpu-a1-m1-cA, 7jpu-a1-m1-cD_7jpu-a1-m1-cC
18 7jpu-a1-m1-cC 1156 41 0.1591 0.0121 0.3415 0.077 7jpu-a1-m1-cD_7jpu-a1-m1-cC
19 7jpu-a1-m1-cC 1156 72 0.2045 0.0156 0.2500 4.0 7jpu-a1-m1-cD_7jpu-a1-m1-cC
20 7jpu-a1-m1-cA 1156 41 0.1591 0.0121 0.3415 0.077 7jpu-a1-m1-cD_7jpu-a1-m1-cA
21 7jpu-a1-m1-cA 1156 72 0.2045 0.0156 0.2500 4.0 7jpu-a1-m1-cD_7jpu-a1-m1-cA
22 5iws-a1-m2-cA 427 50 0.1932 0.0398 0.3400 0.90 5iws-a1-m1-cA_5iws-a1-m2-cA
23 5iws-a1-m1-cA 427 50 0.1932 0.0398 0.3400 0.90 5iws-a1-m1-cA_5iws-a1-m2-cA
24 4w9m-a2-m1-cK 352 37 0.1705 0.0426 0.4054 4.7 4w9m-a2-m1-cI_4w9m-a2-m1-cK
25 4w9m-a2-m1-cI 352 37 0.1705 0.0426 0.4054 4.7 4w9m-a2-m1-cI_4w9m-a2-m1-cK
26 3tqt-a1-m1-cB 337 31 0.1364 0.0356 0.3871 6.7 3tqt-a1-m1-cB_3tqt-a1-m1-cA
27 4dy0-a4-m1-cA 362 43 0.1591 0.0387 0.3256 7.5 4dy0-a4-m1-cA_4dy0-a4-m2-cB
28 4dy0-a3-m1-cA 362 43 0.1591 0.0387 0.3256 7.5 4dy0-a3-m1-cA_4dy0-a3-m1-cB
29 4dy0-a4-m2-cB 370 43 0.1591 0.0378 0.3256 7.5 4dy0-a4-m1-cA_4dy0-a4-m2-cB
30 4dy0-a3-m1-cB 370 43 0.1591 0.0378 0.3256 7.5 4dy0-a3-m1-cA_4dy0-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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