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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
EESISLTFRNMNDFTPEQVARQIPRLKAMLAMRSLLRDLKANLLDNVTFRKELEKILRDP
ALSQTLRDELRALVPEKAW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ps2-a2-m2-cA 79 79 1.0000 1.0000 1.0000 9.15e-52 4ps2-a2-m1-cA_4ps2-a2-m2-cA
2 4ps2-a2-m1-cA 79 79 1.0000 1.0000 1.0000 9.15e-52 4ps2-a2-m1-cA_4ps2-a2-m2-cA
3 1vrd-a2-m4-cB 317 44 0.1772 0.0442 0.3182 3.1 1vrd-a2-m2-cB_1vrd-a2-m4-cB
4 1vrd-a2-m2-cB 317 44 0.1772 0.0442 0.3182 3.1 1vrd-a2-m2-cB_1vrd-a2-m4-cB
5 8fjd-a1-m1-cA 298 25 0.1519 0.0403 0.4800 3.3 8fjd-a1-m1-cB_8fjd-a1-m1-cA
6 5kh2-a2-m1-cD 217 34 0.1772 0.0645 0.4118 6.2 5kh2-a2-m1-cD_5kh2-a2-m1-cC
7 5kh2-a2-m1-cC 222 34 0.1772 0.0631 0.4118 6.4 5kh2-a2-m1-cD_5kh2-a2-m1-cC
8 2ylz-a1-m2-cA 533 38 0.1519 0.0225 0.3158 9.7 2ylz-a1-m1-cA_2ylz-a1-m2-cA
9 2ylz-a1-m1-cA 533 38 0.1519 0.0225 0.3158 9.7 2ylz-a1-m1-cA_2ylz-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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