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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
EEVRFRLDDTDKQEISKTLTSVYRSLEEKGYNPINQIIGYVLSGDPAYIPRYNDARNQIR
KHERDEIIEELVRYYLKGNGIDL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7y86-a1-m1-cB 83 83 1.0000 1.0000 1.0000 5.75e-56 7y86-a1-m1-cA_7y86-a1-m1-cB
2 7y86-a1-m1-cA 81 81 0.9759 1.0000 1.0000 1.29e-54 7y86-a1-m1-cA_7y86-a1-m1-cB
3 5us5-a1-m1-cB 89 83 0.7229 0.6742 0.7229 1.12e-40 5us5-a1-m1-cA_5us5-a1-m1-cB
4 5us5-a1-m1-cA 89 83 0.7229 0.6742 0.7229 1.12e-40 5us5-a1-m1-cA_5us5-a1-m1-cB
5 6tif-a1-m1-cB 87 74 0.5783 0.5517 0.6486 6.90e-31 6tif-a1-m1-cA_6tif-a1-m1-cB
6 6tif-a1-m1-cA 84 74 0.5783 0.5714 0.6486 7.15e-31 6tif-a1-m1-cA_6tif-a1-m1-cB
7 4z0y-a3-m1-cD 346 38 0.1566 0.0376 0.3421 0.37 4z0y-a3-m1-cB_4z0y-a3-m1-cD
8 4z0y-a3-m1-cB 346 38 0.1566 0.0376 0.3421 0.37 4z0y-a3-m1-cB_4z0y-a3-m1-cD
9 1j5y-a2-m4-cA 167 52 0.2169 0.1078 0.3462 4.0 1j5y-a2-m1-cA_1j5y-a2-m4-cA, 1j5y-a2-m2-cA_1j5y-a2-m4-cA, 1j5y-a2-m3-cA_1j5y-a2-m4-cA
10 1j5y-a2-m3-cA 167 52 0.2169 0.1078 0.3462 4.0 1j5y-a2-m3-cA_1j5y-a2-m4-cA
11 1j5y-a2-m2-cA 167 52 0.2169 0.1078 0.3462 4.0 1j5y-a2-m2-cA_1j5y-a2-m4-cA
12 1j5y-a2-m1-cA 167 52 0.2169 0.1078 0.3462 4.0 1j5y-a2-m1-cA_1j5y-a2-m4-cA
13 2nnw-a2-m3-cC 350 26 0.1566 0.0371 0.5000 4.9 2nnw-a2-m1-cC_2nnw-a2-m3-cC
14 2nnw-a2-m1-cC 350 26 0.1566 0.0371 0.5000 4.9 2nnw-a2-m1-cC_2nnw-a2-m3-cC
15 4by9-a1-m1-cL 366 26 0.1566 0.0355 0.5000 5.2 4by9-a1-m1-cI_4by9-a1-m1-cL
16 4by9-a1-m1-cI 366 26 0.1566 0.0355 0.5000 5.2 4by9-a1-m1-cC_4by9-a1-m1-cI, 4by9-a1-m1-cI_4by9-a1-m1-cL
17 4by9-a1-m1-cC 366 26 0.1566 0.0355 0.5000 5.2 4by9-a1-m1-cC_4by9-a1-m1-cI
18 5tf0-a1-m1-cA 706 53 0.2169 0.0255 0.3396 5.8 5tf0-a1-m1-cA_5tf0-a1-m1-cB
19 3zw6-a1-m1-cF 263 42 0.2048 0.0646 0.4048 6.3 3zw6-a1-m1-cE_3zw6-a1-m1-cF
20 3zw6-a1-m1-cE 263 42 0.2048 0.0646 0.4048 6.3 3zw6-a1-m1-cE_3zw6-a1-m1-cF
21 5tf0-a1-m1-cB 706 53 0.2169 0.0255 0.3396 6.4 5tf0-a1-m1-cA_5tf0-a1-m1-cB
22 1kqf-a1-m3-cB 289 23 0.1205 0.0346 0.4348 6.9 1kqf-a1-m2-cB_1kqf-a1-m3-cB
23 1kqf-a1-m2-cB 289 23 0.1205 0.0346 0.4348 6.9 1kqf-a1-m2-cB_1kqf-a1-m3-cB
24 3ss6-a2-m1-cB 391 21 0.1205 0.0256 0.4762 9.1 3ss6-a2-m1-cB_3ss6-a2-m1-cA
25 3ss6-a1-m2-cB 391 21 0.1205 0.0256 0.4762 9.1 3ss6-a1-m1-cB_3ss6-a1-m2-cB, 3ss6-a1-m2-cB_3ss6-a1-m1-cA
26 3ss6-a1-m1-cB 391 21 0.1205 0.0256 0.4762 9.1 3ss6-a1-m1-cB_3ss6-a1-m2-cB
27 3ss6-a2-m1-cA 393 21 0.1205 0.0254 0.4762 9.1 3ss6-a2-m1-cB_3ss6-a2-m1-cA
28 3ss6-a1-m1-cA 393 21 0.1205 0.0254 0.4762 9.1 3ss6-a1-m2-cB_3ss6-a1-m1-cA
29 6yq9-a3-m1-cBBB 476 32 0.1566 0.0273 0.4062 9.6 6yq9-a3-m1-cAAA_6yq9-a3-m1-cBBB
30 6yq9-a3-m1-cAAA 476 32 0.1566 0.0273 0.4062 9.6 6yq9-a3-m1-cAAA_6yq9-a3-m1-cBBB
31 5n72-a1-m2-cA 387 22 0.1446 0.0310 0.5455 9.8 5n72-a1-m1-cA_5n72-a1-m2-cA
32 5n72-a1-m1-cA 387 22 0.1446 0.0310 0.5455 9.8 5n72-a1-m1-cA_5n72-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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