Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=89)
EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNA
NGIRFDPEIPQTLRLEFAKANTKAKNKLV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5cyj-a1-m1-cB 89 89 1.0000 1.0000 1.0000 2.91e-60 5cyj-a1-m1-cA_5cyj-a1-m1-cB
2 5cyj-a1-m1-cA 89 89 1.0000 1.0000 1.0000 2.91e-60 5cyj-a1-m1-cA_5cyj-a1-m1-cB
3 5det-a1-m1-cA 91 91 1.0000 0.9780 0.9780 9.07e-57 5det-a1-m1-cA_5det-a1-m1-cB
4 5det-a1-m1-cB 94 91 1.0000 0.9468 0.9780 1.17e-56 5det-a1-m1-cA_5det-a1-m1-cB
5 5tkz-a1-m1-cB 89 88 0.6292 0.6292 0.6364 6.99e-33 5tkz-a1-m1-cA_5tkz-a1-m1-cB
6 5tkz-a1-m1-cA 89 88 0.6292 0.6292 0.6364 6.99e-33 5tkz-a1-m1-cA_5tkz-a1-m1-cB
7 5bjr-a2-m3-cB 84 84 0.5955 0.6310 0.6310 3.03e-30 5bjr-a2-m1-cB_5bjr-a2-m3-cB
8 5bjr-a2-m1-cB 84 84 0.5955 0.6310 0.6310 3.03e-30 5bjr-a2-m1-cB_5bjr-a2-m3-cB
9 5ca5-a1-m1-cB 248 56 0.2360 0.0847 0.3750 0.027 5ca5-a1-m1-cA_5ca5-a1-m1-cB
10 5ca5-a1-m1-cA 248 56 0.2360 0.0847 0.3750 0.027 5ca5-a1-m1-cA_5ca5-a1-m1-cB
11 7sp0-a1-m1-cB 244 81 0.3034 0.1107 0.3333 0.039 7sp0-a1-m1-cB_7sp0-a1-m1-cA
12 5ifm-a1-m1-cA 254 53 0.2135 0.0748 0.3585 0.20 5ifm-a1-m1-cA_5ifm-a1-m1-cB
13 5ifm-a1-m1-cB 259 53 0.2135 0.0734 0.3585 0.21 5ifm-a1-m1-cA_5ifm-a1-m1-cB
14 3md3-a2-m2-cA 165 64 0.2022 0.1091 0.2812 0.23 3md3-a2-m1-cA_3md3-a2-m2-cA
15 3md3-a2-m1-cA 165 64 0.2022 0.1091 0.2812 0.23 3md3-a2-m1-cA_3md3-a2-m2-cA
16 5ifn-a1-m1-cB 252 53 0.2135 0.0754 0.3585 0.23 5ifn-a1-m1-cB_5ifn-a1-m1-cA
17 5ifn-a1-m1-cA 257 53 0.2135 0.0739 0.3585 0.25 5ifn-a1-m1-cB_5ifn-a1-m1-cA
18 3md1-a4-m5-cB 79 60 0.2022 0.2278 0.3000 0.26 3md1-a4-m4-cB_3md1-a4-m5-cB
19 3md1-a4-m4-cB 79 60 0.2022 0.2278 0.3000 0.26 3md1-a4-m4-cB_3md1-a4-m5-cB
20 7sp0-a1-m1-cA 253 53 0.2247 0.0791 0.3774 0.34 7sp0-a1-m1-cB_7sp0-a1-m1-cA
21 3qua-a1-m1-cB 179 26 0.1236 0.0615 0.4231 5.9 3qua-a1-m1-cA_3qua-a1-m1-cB
22 3qua-a1-m1-cA 179 26 0.1236 0.0615 0.4231 5.9 3qua-a1-m1-cA_3qua-a1-m1-cB
23 2fon-a2-m2-cC 653 61 0.2247 0.0306 0.3279 9.4 2fon-a2-m1-cC_2fon-a2-m2-cC
24 2fon-a2-m1-cC 653 61 0.2247 0.0306 0.3279 9.4 2fon-a2-m1-cC_2fon-a2-m2-cC
25 6npl-a1-m1-cB 861 29 0.1348 0.0139 0.4138 9.8 6npl-a1-m1-cA_6npl-a1-m1-cB
26 6npl-a1-m1-cA 861 29 0.1348 0.0139 0.4138 9.8 6npl-a1-m1-cA_6npl-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600