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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
EEYVVEKILGKRFVNGRPQVLVKWSGFPNENNTWEPLENVGNCMKLVSDFESEVFRLH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4quf-a2-m1-cC 61 58 1.0000 0.9508 1.0000 3.74e-38 4quf-a2-m1-cD_4quf-a2-m1-cC
2 4quf-a2-m1-cD 58 58 1.0000 1.0000 1.0000 5.43e-38 4quf-a2-m1-cD_4quf-a2-m1-cC
3 7vrf-a1-m1-cB 60 55 0.5862 0.5667 0.6182 1.59e-24 7vrf-a1-m1-cB_7vrf-a1-m1-cA
4 7vrf-a1-m1-cA 61 55 0.5862 0.5574 0.6182 1.80e-24 7vrf-a1-m1-cB_7vrf-a1-m1-cA
5 3f2u-a1-m2-cA 51 49 0.4483 0.5098 0.5306 9.53e-14 3f2u-a1-m1-cA_3f2u-a1-m2-cA
6 3f2u-a1-m1-cA 51 49 0.4483 0.5098 0.5306 9.53e-14 3f2u-a1-m1-cA_3f2u-a1-m2-cA
7 3dm1-a5-m1-cC 52 49 0.4138 0.4615 0.4898 7.19e-12 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cC_3dm1-a5-m1-cG
8 3dm1-a5-m1-cA 52 49 0.4138 0.4615 0.4898 7.19e-12 3dm1-a5-m1-cA_3dm1-a5-m1-cG
9 3dm1-a5-m1-cG 53 49 0.4138 0.4528 0.4898 7.35e-12 3dm1-a5-m1-cA_3dm1-a5-m1-cG, 3dm1-a5-m1-cC_3dm1-a5-m1-cG, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
10 3dm1-a5-m1-cE 53 49 0.4138 0.4528 0.4898 7.35e-12 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
11 3h91-a3-m2-cB 52 38 0.2931 0.3269 0.4474 4.37e-07 3h91-a3-m1-cB_3h91-a3-m2-cB
12 3h91-a3-m1-cB 52 38 0.2931 0.3269 0.4474 4.37e-07 3h91-a3-m1-cB_3h91-a3-m2-cB
13 4x3t-a3-m1-cD 62 49 0.3448 0.3226 0.4082 1.95e-06 4x3t-a3-m1-cE_4x3t-a3-m1-cD
14 4x3t-a2-m1-cC 62 49 0.3448 0.3226 0.4082 1.95e-06 4x3t-a2-m1-cF_4x3t-a2-m1-cC
15 4x3t-a2-m1-cF 56 49 0.3448 0.3571 0.4082 1.95e-06 4x3t-a2-m1-cF_4x3t-a2-m1-cC
16 5ejw-a2-m2-cA 80 49 0.3448 0.2500 0.4082 3.22e-06 5ejw-a2-m1-cA_5ejw-a2-m2-cA
17 5ejw-a2-m1-cA 80 49 0.3448 0.2500 0.4082 3.22e-06 5ejw-a2-m1-cA_5ejw-a2-m2-cA
18 4x3t-a3-m1-cE 51 38 0.2931 0.3333 0.4474 4.22e-06 4x3t-a3-m1-cE_4x3t-a3-m1-cD
19 3lwe-a4-m1-cA 61 52 0.2586 0.2459 0.2885 9.80e-06 3lwe-a4-m1-cB_3lwe-a4-m1-cA
20 3lwe-a3-m1-cA 61 52 0.2586 0.2459 0.2885 9.80e-06 3lwe-a3-m2-cB_3lwe-a3-m1-cA
21 3lwe-a4-m1-cB 59 52 0.2586 0.2542 0.2885 9.82e-06 3lwe-a4-m1-cB_3lwe-a4-m1-cA
22 3lwe-a3-m2-cB 59 52 0.2586 0.2542 0.2885 9.82e-06 3lwe-a3-m2-cB_3lwe-a3-m1-cA
23 7slw-a2-m1-cE 56 49 0.2759 0.2857 0.3265 1.01e-05 7slw-a2-m1-cE_7slw-a2-m1-cF
24 7slw-a2-m1-cF 57 49 0.2759 0.2807 0.3265 1.24e-05 7slw-a2-m1-cE_7slw-a2-m1-cF
25 4ft2-a1-m1-cB 670 56 0.3103 0.0269 0.3214 1.69e-05 4ft2-a1-m1-cB_4ft2-a1-m1-cA
26 1pfb-a2-m2-cA 55 50 0.3276 0.3455 0.3800 7.21e-05 1pfb-a2-m1-cA_1pfb-a2-m2-cA
27 1pfb-a2-m1-cA 55 50 0.3276 0.3455 0.3800 7.21e-05 1pfb-a2-m1-cA_1pfb-a2-m2-cA
28 5jjz-a2-m2-cA 59 48 0.2586 0.2542 0.3125 8.44e-05 5jjz-a2-m1-cA_5jjz-a2-m2-cA
29 5jjz-a2-m1-cA 59 48 0.2586 0.2542 0.3125 8.44e-05 5jjz-a2-m1-cA_5jjz-a2-m2-cA
30 4ft2-a1-m1-cA 674 32 0.2069 0.0178 0.3750 1.39e-04 4ft2-a1-m1-cB_4ft2-a1-m1-cA
31 5e4x-a1-m8-cA 50 46 0.2759 0.3200 0.3478 0.008 5e4x-a1-m2-cA_5e4x-a1-m8-cA
32 5e4x-a1-m2-cA 50 46 0.2759 0.3200 0.3478 0.008 5e4x-a1-m2-cA_5e4x-a1-m8-cA
33 2b2w-a1-m1-cC 86 25 0.1897 0.1279 0.4400 0.36 2b2w-a1-m1-cC_2b2w-a1-m1-cA
34 2b2w-a1-m1-cB 175 25 0.1897 0.0629 0.4400 0.36 2b2w-a1-m1-cB_2b2w-a1-m1-cA
35 2b2w-a1-m1-cA 177 25 0.1897 0.0621 0.4400 0.39 2b2w-a1-m1-cB_2b2w-a1-m1-cA, 2b2w-a1-m1-cC_2b2w-a1-m1-cA
36 3ggp-a2-m1-cD 286 24 0.2241 0.0455 0.5417 0.71 3ggp-a2-m1-cB_3ggp-a2-m1-cD
37 3ggp-a2-m1-cB 284 24 0.2241 0.0458 0.5417 0.76 3ggp-a2-m1-cB_3ggp-a2-m1-cD
38 2h1e-a2-m2-cA 166 28 0.1724 0.0602 0.3571 0.88 2h1e-a2-m2-cB_2h1e-a2-m2-cA
39 2h1e-a2-m1-cA 166 28 0.1724 0.0602 0.3571 0.88 2h1e-a2-m2-cB_2h1e-a2-m1-cA
40 2h1e-a2-m2-cB 163 26 0.1724 0.0613 0.3846 0.91 2h1e-a2-m1-cB_2h1e-a2-m2-cB, 2h1e-a2-m2-cB_2h1e-a2-m1-cA, 2h1e-a2-m2-cB_2h1e-a2-m2-cA
41 2h1e-a2-m1-cB 163 26 0.1724 0.0613 0.3846 0.91 2h1e-a2-m1-cB_2h1e-a2-m2-cB
42 4beg-a1-m2-cB 175 30 0.1897 0.0629 0.3667 1.0 4beg-a1-m2-cB_4beg-a1-m1-cA, 4beg-a1-m2-cB_4beg-a1-m2-cA
43 4beg-a1-m2-cA 178 30 0.1897 0.0618 0.3667 1.0 4beg-a1-m1-cA_4beg-a1-m2-cA, 4beg-a1-m2-cB_4beg-a1-m2-cA
44 4beg-a1-m1-cA 178 30 0.1897 0.0618 0.3667 1.0 4beg-a1-m1-cA_4beg-a1-m2-cA, 4beg-a1-m2-cB_4beg-a1-m1-cA
45 3mwy-a2-m2-cW 696 28 0.1724 0.0144 0.3571 1.6 3mwy-a2-m1-cW_3mwy-a2-m2-cW
46 3mwy-a2-m1-cW 696 28 0.1724 0.0144 0.3571 1.6 3mwy-a2-m1-cW_3mwy-a2-m2-cW
47 5akb-a2-m2-cE 588 61 0.2931 0.0289 0.2787 5.1 5akb-a2-m1-cE_5akb-a2-m2-cE
48 5akb-a2-m1-cE 588 61 0.2931 0.0289 0.2787 5.1 5akb-a2-m1-cE_5akb-a2-m2-cE
49 1vyh-a5-m1-cR 218 33 0.1897 0.0505 0.3333 9.1 1vyh-a5-m1-cQ_1vyh-a5-m1-cR
50 1vyh-a5-m1-cQ 218 33 0.1897 0.0505 0.3333 9.1 1vyh-a5-m1-cQ_1vyh-a5-m1-cR

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Reference:
Jacob Schwartz et al.

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