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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
EFAPRSVVIEEFIDTLEPEAYGLDQVGIFEEHGEGNRYYVGYTINKDDEITIHPFVKNER
GELALEKQEWTVRKDGREKKGFHSLQEAEEVIHS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ylx-a1-m1-cB 94 94 1.0000 1.0000 1.0000 3.65e-65 1ylx-a1-m1-cA_1ylx-a1-m1-cB
2 1ylx-a1-m1-cA 94 94 1.0000 1.0000 1.0000 3.65e-65 1ylx-a1-m1-cA_1ylx-a1-m1-cB
3 4qdq-a2-m3-cB 316 38 0.1170 0.0348 0.2895 1.1 4qdq-a2-m1-cB_4qdq-a2-m3-cB
4 4qdq-a2-m1-cB 316 38 0.1170 0.0348 0.2895 1.1 4qdq-a2-m1-cB_4qdq-a2-m3-cB
5 2qql-a1-m2-cA 554 38 0.1170 0.0199 0.2895 1.3 2qql-a1-m1-cA_2qql-a1-m2-cA
6 2qql-a1-m1-cA 554 38 0.1170 0.0199 0.2895 1.3 2qql-a1-m1-cA_2qql-a1-m2-cA
7 6ok3-a1-m1-cA 491 60 0.2021 0.0387 0.3167 1.8 6ok3-a1-m1-cA_6ok3-a1-m1-cB
8 6ok3-a1-m1-cB 492 61 0.2021 0.0386 0.3115 2.4 6ok3-a1-m1-cA_6ok3-a1-m1-cB
9 6zur-a1-m1-cB 398 28 0.1170 0.0276 0.3929 2.5 6zur-a1-m1-cA_6zur-a1-m1-cB
10 6zur-a1-m1-cA 398 28 0.1170 0.0276 0.3929 2.5 6zur-a1-m1-cA_6zur-a1-m1-cB
11 4qds-a1-m1-cA 182 38 0.1170 0.0604 0.2895 2.5 4qds-a1-m1-cB_4qds-a1-m1-cA
12 4qds-a1-m1-cB 179 38 0.1170 0.0615 0.2895 2.8 4qds-a1-m1-cB_4qds-a1-m1-cA
13 2inf-a2-m1-cD 344 33 0.1277 0.0349 0.3636 3.2 2inf-a2-m1-cC_2inf-a2-m1-cD
14 2inf-a2-m1-cC 344 33 0.1277 0.0349 0.3636 3.2 2inf-a2-m1-cC_2inf-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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