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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=41)
EFQTLSPEGSGNLAVIGGVAVGVVLLLVLAGVGFFIHRRRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2k9y-a1-m1-cB 41 41 1.0000 1.0000 1.0000 1.95e-22 2k9y-a1-m1-cA_2k9y-a1-m1-cB
2 2k9y-a1-m1-cA 41 41 1.0000 1.0000 1.0000 1.95e-22 2k9y-a1-m1-cA_2k9y-a1-m1-cB
3 6tup-a1-m41-cA 46 33 0.2683 0.2391 0.3333 0.41 6tup-a1-m23-cA_6tup-a1-m41-cA
4 6tup-a1-m4-cA 46 33 0.2683 0.2391 0.3333 0.41 6tup-a1-m3-cA_6tup-a1-m4-cA
5 6tup-a1-m39-cA 46 33 0.2683 0.2391 0.3333 0.41 6tup-a1-m22-cA_6tup-a1-m39-cA
6 6tup-a1-m38-cA 46 33 0.2683 0.2391 0.3333 0.41 6tup-a1-m23-cA_6tup-a1-m38-cA
7 6tup-a1-m3-cA 46 33 0.2683 0.2391 0.3333 0.41 6tup-a1-m3-cA_6tup-a1-m4-cA
8 6tup-a1-m23-cA 46 33 0.2683 0.2391 0.3333 0.41 6tup-a1-m23-cA_6tup-a1-m38-cA, 6tup-a1-m23-cA_6tup-a1-m41-cA
9 6tup-a1-m22-cA 46 33 0.2683 0.2391 0.3333 0.41 6tup-a1-m22-cA_6tup-a1-m39-cA
10 2ifn-a1-m9-cA 46 33 0.2683 0.2391 0.3333 0.41 2ifn-a1-m3-cA_2ifn-a1-m9-cA
11 2ifn-a1-m3-cA 46 33 0.2683 0.2391 0.3333 0.41 2ifn-a1-m3-cA_2ifn-a1-m9-cA
12 1pfi-a1-m9-cB 46 33 0.2683 0.2391 0.3333 0.41 1pfi-a1-m4-cA_1pfi-a1-m9-cB, 1pfi-a1-m6-cB_1pfi-a1-m9-cB, 1pfi-a1-m7-cA_1pfi-a1-m9-cB
13 1pfi-a1-m7-cA 46 33 0.2683 0.2391 0.3333 0.41 1pfi-a1-m7-cA_1pfi-a1-m9-cB
14 1pfi-a1-m6-cB 46 33 0.2683 0.2391 0.3333 0.41 1pfi-a1-m6-cB_1pfi-a1-m9-cB
15 1pfi-a1-m4-cA 46 33 0.2683 0.2391 0.3333 0.41 1pfi-a1-m4-cA_1pfi-a1-m9-cB
16 1ifn-a1-m9-cA 46 33 0.2683 0.2391 0.3333 0.41 1ifn-a1-m20-cA_1ifn-a1-m9-cA
17 1ifn-a1-m20-cA 46 33 0.2683 0.2391 0.3333 0.41 1ifn-a1-m20-cA_1ifn-a1-m9-cA
18 2y7j-a1-m1-cD 281 21 0.2683 0.0391 0.5238 2.6 2y7j-a1-m1-cB_2y7j-a1-m1-cD, 2y7j-a1-m1-cD_2y7j-a1-m1-cA
19 2y7j-a1-m1-cB 281 21 0.2683 0.0391 0.5238 2.6 2y7j-a1-m1-cB_2y7j-a1-m1-cD
20 2y7j-a1-m1-cA 284 21 0.2683 0.0387 0.5238 2.6 2y7j-a1-m1-cD_2y7j-a1-m1-cA
21 2ptg-a2-m2-cB 224 31 0.3171 0.0580 0.4194 9.6 2ptg-a2-m1-cB_2ptg-a2-m2-cB, 2ptg-a2-m2-cA_2ptg-a2-m2-cB
22 2ptg-a2-m2-cA 224 31 0.3171 0.0580 0.4194 9.6 2ptg-a2-m2-cA_2ptg-a2-m2-cB
23 2ptg-a2-m1-cB 224 31 0.3171 0.0580 0.4194 9.6 2ptg-a2-m1-cB_2ptg-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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