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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
EFSEDCENIFHDNAYLLKLDCEAGRVDPVEYDDISDEEIYEITVDVGVSSEDQEKVAKII
RECIAQVSTQDCTKFSEIYDCYMKKKICNYYPE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5kx4-a3-m1-cA 95 93 1.0000 0.9789 1.0000 2.05e-63 5kx4-a3-m1-cB_5kx4-a3-m1-cA
2 5kx4-a3-m1-cB 93 93 1.0000 1.0000 1.0000 2.23e-63 5kx4-a3-m1-cB_5kx4-a3-m1-cA
3 1j5t-a2-m4-cA 233 46 0.1828 0.0730 0.3696 1.1 1j5t-a2-m1-cA_1j5t-a2-m4-cA, 1j5t-a2-m2-cA_1j5t-a2-m4-cA, 1j5t-a2-m3-cA_1j5t-a2-m4-cA
4 1j5t-a2-m3-cA 233 46 0.1828 0.0730 0.3696 1.1 1j5t-a2-m3-cA_1j5t-a2-m4-cA
5 1j5t-a2-m2-cA 233 46 0.1828 0.0730 0.3696 1.1 1j5t-a2-m2-cA_1j5t-a2-m4-cA
6 1j5t-a2-m1-cA 233 46 0.1828 0.0730 0.3696 1.1 1j5t-a2-m1-cA_1j5t-a2-m4-cA
7 2afb-a1-m3-cA 322 43 0.1828 0.0528 0.3953 1.3 2afb-a1-m3-cB_2afb-a1-m3-cA
8 2afb-a1-m1-cA 322 43 0.1828 0.0528 0.3953 1.3 2afb-a1-m3-cB_2afb-a1-m1-cA
9 1sed-a1-m1-cC 112 37 0.1290 0.1071 0.3243 3.0 1sed-a1-m1-cA_1sed-a1-m1-cC
10 1sed-a1-m1-cA 112 37 0.1290 0.1071 0.3243 3.0 1sed-a1-m1-cA_1sed-a1-m1-cC
11 1ch4-a1-m1-cD 146 62 0.1935 0.1233 0.2903 3.1 1ch4-a1-m1-cA_1ch4-a1-m1-cD, 1ch4-a1-m1-cB_1ch4-a1-m1-cD, 1ch4-a1-m1-cC_1ch4-a1-m1-cD
12 1ch4-a1-m1-cC 146 62 0.1935 0.1233 0.2903 3.1 1ch4-a1-m1-cC_1ch4-a1-m1-cD
13 1ch4-a1-m1-cB 146 62 0.1935 0.1233 0.2903 3.1 1ch4-a1-m1-cB_1ch4-a1-m1-cD
14 1ch4-a1-m1-cA 146 62 0.1935 0.1233 0.2903 3.1 1ch4-a1-m1-cA_1ch4-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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