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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=45)
EFSEEQKRTLDLLFLFDRRTEERRRWLSQRLGLNEEQIERWFRRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4zn8-a1-m1-cA 50 45 1.0000 0.9000 1.0000 1.65e-24 4zn8-a1-m1-cB_4zn8-a1-m1-cA, 4zn8-a1-m1-cD_4zn8-a1-m1-cA
2 4zn8-a1-m1-cB 48 45 1.0000 0.9375 1.0000 1.86e-24 4zn8-a1-m1-cB_4zn8-a1-m1-cA
3 4zn8-a1-m1-cD 45 45 1.0000 1.0000 1.0000 2.21e-24 4zn8-a1-m1-cD_4zn8-a1-m1-cA
4 2mg4-a1-m1-cB 66 46 0.8444 0.5758 0.8261 1.00e-17 2mg4-a1-m1-cA_2mg4-a1-m1-cB
5 2mg4-a1-m1-cA 66 46 0.8444 0.5758 0.8261 1.00e-17 2mg4-a1-m1-cA_2mg4-a1-m1-cB
6 1y66-a1-m1-cD 46 24 0.2444 0.2391 0.4583 0.30 1y66-a1-m1-cB_1y66-a1-m1-cD, 1y66-a1-m1-cD_1y66-a1-m1-cA
7 1y66-a1-m1-cB 46 24 0.2444 0.2391 0.4583 0.30 1y66-a1-m1-cB_1y66-a1-m1-cA, 1y66-a1-m1-cB_1y66-a1-m1-cD
8 1y66-a1-m1-cA 50 24 0.2444 0.2200 0.4583 0.93 1y66-a1-m1-cB_1y66-a1-m1-cA, 1y66-a1-m1-cD_1y66-a1-m1-cA
9 3k2a-a3-m8-cB 54 23 0.2000 0.1667 0.3913 6.4 3k2a-a3-m4-cA_3k2a-a3-m8-cB, 3k2a-a3-m4-cB_3k2a-a3-m8-cB
10 3k2a-a3-m4-cB 54 23 0.2000 0.1667 0.3913 6.4 3k2a-a3-m4-cB_3k2a-a3-m8-cB
11 3k2a-a3-m4-cA 53 23 0.2000 0.1698 0.3913 6.6 3k2a-a3-m4-cA_3k2a-a3-m8-cB
12 7lhz-a2-m1-cD 677 36 0.2889 0.0192 0.3611 9.6 7lhz-a2-m1-cD_7lhz-a2-m1-cC
13 7yg0-a1-m1-cB 854 15 0.1778 0.0094 0.5333 10.0 7yg0-a1-m1-cA_7yg0-a1-m1-cB
14 7yg0-a1-m1-cA 854 15 0.1778 0.0094 0.5333 10.0 7yg0-a1-m1-cA_7yg0-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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