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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=48)
EFSEEQKRTLDLLFLFDRRTEERRRWLSQRLGLNEEQIERWFRRKEQQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4zn8-a1-m1-cA 50 48 1.0000 0.9600 1.0000 2.39e-26 4zn8-a1-m1-cB_4zn8-a1-m1-cA, 4zn8-a1-m1-cD_4zn8-a1-m1-cA
2 4zn8-a1-m1-cB 48 48 1.0000 1.0000 1.0000 2.67e-26 4zn8-a1-m1-cB_4zn8-a1-m1-cA
3 4zn8-a1-m1-cD 45 45 0.9375 1.0000 1.0000 1.98e-24 4zn8-a1-m1-cD_4zn8-a1-m1-cA
4 2mg4-a1-m1-cB 66 49 0.8542 0.6212 0.8367 1.28e-19 2mg4-a1-m1-cA_2mg4-a1-m1-cB
5 2mg4-a1-m1-cA 66 49 0.8542 0.6212 0.8367 1.28e-19 2mg4-a1-m1-cA_2mg4-a1-m1-cB
6 1y66-a1-m1-cD 46 28 0.2708 0.2826 0.4643 0.15 1y66-a1-m1-cB_1y66-a1-m1-cD, 1y66-a1-m1-cD_1y66-a1-m1-cA
7 1y66-a1-m1-cB 46 28 0.2708 0.2826 0.4643 0.15 1y66-a1-m1-cB_1y66-a1-m1-cA, 1y66-a1-m1-cB_1y66-a1-m1-cD
8 1y66-a1-m1-cA 50 28 0.2708 0.2600 0.4643 0.54 1y66-a1-m1-cB_1y66-a1-m1-cA, 1y66-a1-m1-cD_1y66-a1-m1-cA
9 3k2a-a3-m4-cA 53 23 0.1875 0.1698 0.3913 9.8 3k2a-a3-m4-cA_3k2a-a3-m8-cB
10 3k2a-a3-m8-cB 54 23 0.1875 0.1667 0.3913 9.9 3k2a-a3-m4-cA_3k2a-a3-m8-cB, 3k2a-a3-m4-cB_3k2a-a3-m8-cB
11 3k2a-a3-m4-cB 54 23 0.1875 0.1667 0.3913 9.9 3k2a-a3-m4-cB_3k2a-a3-m8-cB

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Reference:
Jacob Schwartz et al.

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