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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
EFSQLLALASLLGQQQAEIQRCREDLQKKESLMMETIAKIKALALEHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7dh4-a1-m2-cA 49 49 1.0000 1.0000 1.0000 1.40e-28 7dh4-a1-m2-cA_7dh4-a1-m2-cB
2 7dh4-a1-m2-cB 49 48 0.9796 0.9796 1.0000 7.83e-28 7dh4-a1-m2-cA_7dh4-a1-m2-cB
3 7dhb-a1-m2-cA 46 33 0.6531 0.6957 0.9697 1.19e-16 7dhb-a1-m1-cA_7dhb-a1-m2-cA
4 7dhb-a1-m1-cA 46 33 0.6531 0.6957 0.9697 1.19e-16 7dhb-a1-m1-cA_7dhb-a1-m2-cA
5 3ntn-a1-m1-cC 211 47 0.3673 0.0853 0.3830 0.18 3ntn-a1-m1-cA_3ntn-a1-m1-cC
6 3ntn-a1-m1-cA 211 47 0.3673 0.0853 0.3830 0.18 3ntn-a1-m1-cA_3ntn-a1-m1-cC
7 4cyi-a1-m1-cF 399 30 0.2653 0.0326 0.4333 0.87 4cyi-a1-m1-cE_4cyi-a1-m1-cF
8 3sz3-a1-m2-cA 341 40 0.3061 0.0440 0.3750 0.91 3sz3-a1-m1-cA_3sz3-a1-m2-cA
9 3sz3-a1-m1-cA 341 40 0.3061 0.0440 0.3750 0.91 3sz3-a1-m1-cA_3sz3-a1-m2-cA
10 4cyi-a1-m1-cE 385 30 0.2653 0.0338 0.4333 1.1 4cyi-a1-m1-cE_4cyi-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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