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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=44)
EGCPTNGPKIPSIATGMVGALLLLLVVALGIGLFMRRRHIVRKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5lv6-a1-m1-cB 44 44 1.0000 1.0000 1.0000 2.13e-25 5lv6-a1-m1-cA_5lv6-a1-m1-cB
2 5lv6-a1-m1-cA 44 44 1.0000 1.0000 1.0000 2.13e-25 5lv6-a1-m1-cA_5lv6-a1-m1-cB
3 2m0b-a1-m1-cB 44 44 1.0000 1.0000 1.0000 2.13e-25 2m0b-a1-m1-cA_2m0b-a1-m1-cB
4 2m0b-a1-m1-cA 44 44 1.0000 1.0000 1.0000 2.13e-25 2m0b-a1-m1-cA_2m0b-a1-m1-cB
5 2m20-a1-m1-cB 60 36 0.7727 0.5667 0.9444 1.08e-05 2m20-a1-m1-cA_2m20-a1-m1-cB
6 2m20-a1-m1-cA 60 36 0.7727 0.5667 0.9444 1.08e-05 2m20-a1-m1-cA_2m20-a1-m1-cB
7 2lcx-a1-m1-cB 44 36 0.3182 0.3182 0.3889 5.44e-04 2lcx-a1-m1-cA_2lcx-a1-m1-cB
8 2lcx-a1-m1-cA 44 36 0.3182 0.3182 0.3889 5.44e-04 2lcx-a1-m1-cA_2lcx-a1-m1-cB
9 5hto-a1-m1-cB 303 25 0.2045 0.0297 0.3600 5.7 5hto-a1-m1-cB_5hto-a1-m1-cD, 5hto-a1-m1-cB_5hto-a1-m1-cE
10 5hto-a1-m1-cD 304 25 0.2045 0.0296 0.3600 5.7 5hto-a1-m1-cB_5hto-a1-m1-cD
11 5hs4-a1-m4-cA 301 25 0.2045 0.0299 0.3600 5.8 5hs4-a1-m1-cA_5hs4-a1-m4-cA
12 5hs4-a1-m1-cA 301 25 0.2045 0.0299 0.3600 5.8 5hs4-a1-m1-cA_5hs4-a1-m4-cA
13 5hto-a1-m1-cE 305 25 0.2045 0.0295 0.3600 6.1 5hto-a1-m1-cB_5hto-a1-m1-cE
14 8e7c-a1-m1-cB 292 24 0.2500 0.0377 0.4583 8.9 8e7c-a1-m1-cB_8e7c-a1-m2-cA
15 8e7c-a1-m2-cA 301 24 0.2500 0.0365 0.4583 8.9 8e7c-a1-m1-cB_8e7c-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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