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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
EGELKTIGQAKVSKLQEKKLDPRSKITFNDFKGIAKEVGIEEKEINSVSNALAQSGSIIY
LPNSLNENLKTSVFTKPAHIYQSLEHILDI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5z2i-a2-m1-cD 90 90 1.0000 1.0000 1.0000 6.96e-61 5z2i-a2-m1-cD_5z2i-a2-m1-cC
2 5z2i-a2-m1-cC 91 90 1.0000 0.9890 1.0000 7.41e-61 5z2i-a2-m1-cD_5z2i-a2-m1-cC
3 6laf-a1-m1-cA 171 65 0.2333 0.1228 0.3231 0.99 6laf-a1-m1-cA_6laf-a1-m1-cB
4 6laf-a1-m1-cB 187 65 0.2333 0.1123 0.3231 1.2 6laf-a1-m1-cA_6laf-a1-m1-cB
5 6lad-a8-m1-cF 182 65 0.2333 0.1154 0.3231 1.3 6lad-a8-m1-cF_6lad-a8-m1-cE
6 6lad-a8-m1-cE 186 65 0.2333 0.1129 0.3231 1.4 6lad-a8-m1-cF_6lad-a8-m1-cE
7 6kny-a3-m4-cB 190 65 0.2333 0.1105 0.3231 1.4 6kny-a3-m3-cB_6kny-a3-m4-cB
8 6kny-a3-m3-cB 190 65 0.2333 0.1105 0.3231 1.4 6kny-a3-m3-cB_6kny-a3-m4-cB
9 4r6i-a1-m1-cB 439 38 0.1778 0.0364 0.4211 2.3 4r6i-a1-m1-cB_4r6i-a1-m1-cA
10 1nf2-a4-m2-cB 267 74 0.1889 0.0637 0.2297 2.6 1nf2-a4-m2-cA_1nf2-a4-m2-cB
11 1nf2-a4-m2-cA 267 74 0.1889 0.0637 0.2297 2.6 1nf2-a4-m2-cA_1nf2-a4-m2-cB
12 4r6i-a1-m1-cA 463 38 0.1778 0.0346 0.4211 2.7 4r6i-a1-m1-cB_4r6i-a1-m1-cA
13 3wo8-a1-m1-cB 448 14 0.1111 0.0223 0.7143 9.0 3wo8-a1-m1-cA_3wo8-a1-m1-cB
14 3on0-a1-m2-cA 121 32 0.1333 0.0992 0.3750 9.3 3on0-a1-m2-cD_3on0-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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