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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
EGNGTILVKGNVTIIVEGNADITVKGDATTLVEGNQTNTVNGNLSWKVAGTVDWDVGGDW
TEKMASMSSISSGQYTIDGSRIDIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3a1m-a1-m1-cF 85 85 1.0000 1.0000 1.0000 3.31e-54 3a1m-a1-m1-cF_3a1m-a1-m1-cC
2 4osd-a2-m1-cK 93 85 1.0000 0.9140 1.0000 3.70e-54 4osd-a2-m1-cH_4osd-a2-m1-cK
3 4osd-a2-m1-cH 93 85 1.0000 0.9140 1.0000 3.70e-54 4osd-a2-m1-cH_4osd-a2-m1-cK
4 4osd-a1-m1-cE 93 85 1.0000 0.9140 1.0000 3.70e-54 4osd-a1-m1-cC_4osd-a1-m1-cE
5 4osd-a1-m1-cC 93 85 1.0000 0.9140 1.0000 3.70e-54 4osd-a1-m1-cC_4osd-a1-m1-cE
6 3a1m-a1-m1-cA 112 85 1.0000 0.7589 1.0000 4.84e-54 3a1m-a1-m1-cC_3a1m-a1-m1-cA
7 3a1m-a1-m1-cC 111 84 0.9882 0.7568 1.0000 2.90e-53 3a1m-a1-m1-cC_3a1m-a1-m1-cA, 3a1m-a1-m1-cF_3a1m-a1-m1-cC
8 2z6b-a1-m3-cA 573 85 1.0000 0.1483 1.0000 4.18e-51 2z6b-a1-m2-cA_2z6b-a1-m3-cA
9 2z6b-a1-m2-cA 573 85 1.0000 0.1483 1.0000 4.18e-51 2z6b-a1-m2-cA_2z6b-a1-m3-cA
10 6p2a-a1-m1-cB 145 85 0.8588 0.5034 0.8588 4.99e-42 6p2a-a1-m1-cA_6p2a-a1-m1-cB
11 6p2a-a1-m1-cA 145 85 0.8588 0.5034 0.8588 4.99e-42 6p2a-a1-m1-cA_6p2a-a1-m1-cB
12 6p20-a1-m1-cC 109 75 0.8471 0.6606 0.9600 3.24e-37 6p20-a1-m1-cB_6p20-a1-m1-cC
13 6p20-a1-m1-cB 109 75 0.8471 0.6606 0.9600 3.24e-37 6p20-a1-m1-cB_6p20-a1-m1-cC
14 4b2t-a1-m1-cz 481 53 0.2118 0.0374 0.3396 0.97 4b2t-a1-m1-cZ_4b2t-a1-m1-cz
15 4b2t-a1-m1-cZ 481 53 0.2118 0.0374 0.3396 0.97 4b2t-a1-m1-cZ_4b2t-a1-m1-cz
16 7nvo-a1-m1-cz 323 53 0.2118 0.0557 0.3396 1.9 7nvo-a1-m1-cZ_7nvo-a1-m1-cz
17 7nvo-a1-m1-cZ 323 53 0.2118 0.0557 0.3396 1.9 7nvo-a1-m1-cZ_7nvo-a1-m1-cz
18 2qqe-a1-m2-cA 164 39 0.1647 0.0854 0.3590 7.4 2qqe-a1-m2-cB_2qqe-a1-m2-cA
19 2qqe-a1-m1-cA 164 39 0.1647 0.0854 0.3590 7.4 2qqe-a1-m2-cB_2qqe-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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