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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
EGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSEYHELSGRA
KDLGSAAVLIAIIDAVITWAILLWSHFG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ze3-a1-m1-cF 88 88 1.0000 1.0000 1.0000 5.81e-55 3ze3-a1-m1-cE_3ze3-a1-m1-cF
2 5dwk-a2-m1-cC 106 87 0.9886 0.8208 1.0000 1.12e-53 5dwk-a2-m1-cE_5dwk-a2-m1-cC
3 5dwk-a2-m1-cE 84 84 0.9545 1.0000 1.0000 5.51e-51 5dwk-a2-m1-cE_5dwk-a2-m1-cC
4 2kdc-a1-m1-cC 121 88 0.9205 0.6694 0.9205 1.62e-49 2kdc-a1-m1-cB_2kdc-a1-m1-cC
5 2kdc-a1-m1-cB 121 88 0.9205 0.6694 0.9205 1.62e-49 2kdc-a1-m1-cB_2kdc-a1-m1-cC
6 3ze3-a1-m1-cE 83 86 0.9432 1.0000 0.9651 1.86e-48 3ze3-a1-m1-cE_3ze3-a1-m1-cF
7 4by9-a1-m1-cL 366 32 0.1932 0.0464 0.5312 0.22 4by9-a1-m1-cI_4by9-a1-m1-cL
8 4by9-a1-m1-cI 366 32 0.1932 0.0464 0.5312 0.22 4by9-a1-m1-cC_4by9-a1-m1-cI, 4by9-a1-m1-cI_4by9-a1-m1-cL
9 4by9-a1-m1-cC 366 32 0.1932 0.0464 0.5312 0.22 4by9-a1-m1-cC_4by9-a1-m1-cI
10 2nnw-a2-m3-cC 350 32 0.1932 0.0486 0.5312 0.22 2nnw-a2-m1-cC_2nnw-a2-m3-cC
11 2nnw-a2-m1-cC 350 32 0.1932 0.0486 0.5312 0.22 2nnw-a2-m1-cC_2nnw-a2-m3-cC

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Reference:
Jacob Schwartz et al.

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