Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=88)
EGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSEYHELSGRA
KDLGSAAVLIAIIDAVITWAILLWSHFG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ze3-a1-m1-cF 88 88 1.0000 1.0000 1.0000 5.81e-55 3ze3-a1-m1-cE_3ze3-a1-m1-cF
2 5dwk-a2-m1-cC 106 87 0.9886 0.8208 1.0000 1.12e-53 5dwk-a2-m1-cE_5dwk-a2-m1-cC
3 5dwk-a2-m1-cE 84 84 0.9545 1.0000 1.0000 5.51e-51 5dwk-a2-m1-cE_5dwk-a2-m1-cC
4 2kdc-a1-m1-cC 121 88 0.9205 0.6694 0.9205 1.62e-49 2kdc-a1-m1-cB_2kdc-a1-m1-cC
5 2kdc-a1-m1-cB 121 88 0.9205 0.6694 0.9205 1.62e-49 2kdc-a1-m1-cB_2kdc-a1-m1-cC
6 3ze3-a1-m1-cE 83 86 0.9432 1.0000 0.9651 1.86e-48 3ze3-a1-m1-cE_3ze3-a1-m1-cF
7 4by9-a1-m1-cL 366 32 0.1932 0.0464 0.5312 0.22 4by9-a1-m1-cI_4by9-a1-m1-cL
8 4by9-a1-m1-cI 366 32 0.1932 0.0464 0.5312 0.22 4by9-a1-m1-cC_4by9-a1-m1-cI, 4by9-a1-m1-cI_4by9-a1-m1-cL
9 4by9-a1-m1-cC 366 32 0.1932 0.0464 0.5312 0.22 4by9-a1-m1-cC_4by9-a1-m1-cI
10 2nnw-a2-m3-cC 350 32 0.1932 0.0486 0.5312 0.22 2nnw-a2-m1-cC_2nnw-a2-m3-cC
11 2nnw-a2-m1-cC 350 32 0.1932 0.0486 0.5312 0.22 2nnw-a2-m1-cC_2nnw-a2-m3-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600